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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5110_PI390587928Hv_44K_v2TGTGTTACAACTGTCTTTCTCCTCTGGATGCAATTTGCCCGTAAAAGATGTTTGATACTG280GeneList: darkturquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.5130.7391.4681.9340.9531.376
Raw 3.5959.97019.90538.7366.77211.724



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC039698103e-25471 - 53010060 / 60minusABC03969
Harvest35U35_144638103e-25281 - 34010060 / 60plus



Contig Sequence (810 bp)

>U35_14463 810 Hv_44K_v2
GCTGGATTCAGGTGCTTGCTGCACATCGATATGGCATCAAGAGGGTGATATTACCAGAAA
GAAACTTGAAGGACTTGGCTGAGATTCCAGCACCGATCCTCGCTGGCATTGAGGTATGTC
ATTCCTTACTGTTAGTTGCTTAGATTTGCAGGACCGGCTACTGTACCTTATTTAGCTTGA
TTGTTAAGGTTATGCTCTCAGCTACTAGTGCTACACAAATTATTCAGCATTGGAAAGTTC
ATCAATAGCTCTAGAAGTTGAGCTAAAAGTTGATTGATATTGTGTTACAACTGTCTTTCT
CCTCTGGATGCAATTTGCCCGTAAAAGATGTTTGATACTGACTTGTATTTACTTTGCTGC
TGGTAGATTCTGCTCGTGAAGCGCATCGAGGAAGTACTTGGCCATGCTTTTGAGAATGGA
TTCCCTTTGAGGCTACACTCCAGTCTATAGCACGGACAAATCCCAATTGGCGCCTGATGT
AGTATTTCCTCGGTGGCCATGTACCTGTTTTGAAGATTCGTCGCTATTCACTGCCCAGAT
ATCTACAAACGAGCGACTGAGCGTAGGCGAGCAATTGCTCCATCGGAGTGAAATCTCATG
ACGCCAGCATCGCTCGTCCAATTCAGTTAAGCTAATATGCGGAATGTGTATATGGGTACT
TGCTATCCACAAAAGCGGCAGGGAGATCTGCTCCGGTCTTTGTGCTTGTATTTATAGAGG
GATGCTCATCTATCTATGCTCGGTTTGGTATTGGTAGCAAGGAGATCCACCTGTTGTTGT
CGGTTTGGGTGTATAGTAACCATTTCAGCC



Homology of Contig U35_14463 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None