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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5109_PI390587928Hv_44K_v2GCTATCGCCATATATATAATGTAATCTGTCATGCCATGTTACCGTCAGATTCCAATAATA545GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3622.1121.5070.9540.3910.407
Raw 4600.35711325.3436998.5207614.537983.6281163.632



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_61751.16292e-24545 - 60410060 / 60plus ABC01611 ABC01614
JLOC1JLOC1_40369.18678e-25546 - 60510060 / 60plus
Harvest21ABC016116383e-25535 - 59410060 / 60plusABC01611
Harvest21ABC016096243e-25530 - 58910060 / 60plus
Harvest35U35_144646493e-25546 - 60510060 / 60plus



Contig Sequence (649 bp)

>U35_14464 649 Hv_44K_v2
GGGGACACCACTCGCAAGCACAGTAGCCAGCAGCTCAGCAGCTAGCAAGGGAAGATGGGC
AGCGCCGGAGCCACCCTCCTCCGCTTCCTGCTGTTGGCGTCGGTCGTCGCCGGGTTCGCG
GCGCATCTCGCCGCGGGGGAGAAGGACTGCTACCACGAGAGGGACAGCATCATGGGCATC
TGCATCGGGAGCATCAAGAAGAACGCCCACTACGTGCCACCATCGAGGGCCTGCTGCAGC
GAGGTGAAGAAGGTTGACATGCCCTGCGTCTGCCGCGTCCTCACCGCCACCGACGAGCGT
ACCGTCAACCCCGTGAAGCTCGTCCGCTGCGCCCACGACTGCAAAGTCGACCTCGCCATC
GGGAGCAAATGCGGAACTTACACCATCGGGGGGCCGGTGCCACCATCCGCGCACCCGTGA
AGAGCTTCGATCATGGGAATCGCGCAAGAGGAAGGCCAGTGAAGGAGATGGACACTGGAG
AGGTCATGGCGGAATAATAACCTAAATAAAGAGCGCGCGCGCGTGCATGTATGCTGAGCT
AGTGAGCTATCGCCATATATATAATGTAATCTGTCATGCCATGTTACCGTCAGATTCCAA
TAATAATAGTAAGAATAAAAGCCTTCCATCAAAAAAAAAAAAAAAAAAA



Homology of Contig U35_14464 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None