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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5002_PI390587928Hv_44K_v2TTTAGATGACTTATAAACCGAGACGACGGGAGTAGCTGACATCACCGTTTATACACACGC822GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_5503.422792e-241530 - 158910060 / 60plus ABC02427 ABC02433 ABC02436 ABC43768
MLOCMLOC_5503.227032e-241951 - 201010060 / 60plus ABC02427 ABC02433 ABC02436 ABC43768
Harvest21ABC0243110173e-25823 - 88210060 / 60plus
Harvest35U35_55010183e-25823 - 88210060 / 60plus



Contig Sequence (1018 bp)

>U35_550 1018 Hv_44K_v2
AATAGAAAGGCATGTATGTGTTGGACGTGTTGGAGTTGGACATTATTGGTGAGGTGGTCA
TCTCCAGTCCAATCACAGGGAAATCTAGTAGGACCATATGCCGATTGATGAGCAAAACAT
GTTATATATCTATGCTAATCGGAGATAGTGATGCGATGTGCATGTGATGGCCAGAGTATG
TAGGCACGAATCTGTCCTAGATGCGCTTTGGTACACCCCTTGGTTTTTAACCGTCCTTAT
GGATAGATGTTAGAAGTCACAACATCTTGTTCATGGTACATTCATGCTAGCTAGTACAAC
ACCATTTTTTAGTTTGGAAGATTCTCTTGAGCTAAATGGAGACTATAACTTCAAACGTAC
TAGCCTTATATATAGCGTTCGTAATATTACTGTATTTCTGAATACTCCGAAATACCTATC
TAAAAATCTAAAAAGCTTAGATTTTTTTCTTCCGATTTATGTTTATGTTGATCTAAAGTG
CTTTTACTAGTTTACCATAGTGAGCACTGGTCGAACATGGCTATGTTTCTTCAGTATTTA
AATCTACATACTACTTTCTTCGTCTCGGTTTATAAGTCATCTTAGGTTGTGCATCGCAAC
CAAGACGAAGATGAAAACAAGAGAAATTAATGTTAATTTGCTAATTAATACCATTGCATG
CAATGAATTGACCAGTGCATGTCGTGTTAGTTAGCCTCACGTCATTAAAAACATACATGC
CCCAAATCCCTTATTGGTTGATTCCTTTATTCATGTCAAAAGACAAGAAACAAGATGAAA
GTTAATGCACCGTGCCTTAGTATTTTAGAATTATTGTTTTTCTTTAGATGACTTATAAAC
CGAGACGACGGGAGTAGCTGACATCACCGTTTATACACACGCGCAGGGCTAGGCCATACA
ACGCGACGAGCTTCGACGCGTACGTGCTGGAGGGGAGCGCGCCGGCGCTGCCGGAGACGA
AGCGGCTCTACTACAAGCTACTCAAGGTGGGCATCAAGCCGGTGTTCATCACAGGCCG



Homology of Contig U35_550 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None