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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4955_PI390587928Hv_44K_v2GTTATACTTGTGTGGCTCCGCAACTTTGCAAAAACATCGCTCGGATATTTGTTTCCATGA898GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_68507.55923e-2161 - 1209758 / 60minus None
MLOCMLOC_68507.45903e-2161 - 1209758 / 60minus None
MLOCMLOC_68507.119573e-211288 - 13479758 / 60minus ABC12340
JLOC1JLOC1_45330.119562e-21618 - 6779758 / 60plus
JLOC1JLOC1_45329.214552e-211180 - 12399758 / 60minus
JLOC1JLOC1_45329.115122e-211237 - 12969758 / 60minus
Harvest35U35_190229583e-25899 - 95810060 / 60plus



Contig Sequence (958 bp)

>U35_19022 958 Hv_44K_v2
CCCCTGCCCTGACAGTGATGCCTGGATGAAATCTAGCGTGCCCCTCTGCCCATTCCGGGT
AATTTCCTCCGGGTTTGATAGAAGATGAGGAAGAAGAAGCCCTCGAGGTTGACTTTGCTA
ATAAATATCTGGGAGGAGGTGCACTTTCAAGGGGTTGTGTGCAGGAAGAGATCCGTTTCA
TGATAAACCCAGAACTGATTGTAGGCATGCTCTTCATGGCTTCAATGGAAGATAATGAGG
CTATAGAAATTGTCGGTGCAGAAAGGTTCTCACAGTATATGGGGTACGGCTCCTCATTCC
GCTTTGTCGGTGATTATTTAGATACGAAGCCCCTTGATGCAATGGGTCGACGAAAAACTA
GGATTGTAGCAATTGATGCCTTGGACTGTCCAACTAAGTTACAGTATGAAACGAGTGGTC
TTTTAAGGGAAGTGAACAAAGCATTTGTTGGTTTCTTGGATCAATCAAAGCATCAGTTTG
ATGTGAAGCCTTTCCAGGATTCTAATTCCAAGGATAGTCGTCCAAGTGTCAACTCAGTTG
ACTGTATAGGAGTTTCAACCGGAAACTGGGGTTGTGGGGCTTTTGGTGGAAACCCTGAAC
TTAAGAGCATGATTCAGTGGCTTGCTGCATCACAGGCACACCGACCTTTTGTTAATTACT
ATACTTTTGAGGATGCGTCACTTAGAAGACTAGAAGAGGTGATCCAGTGGGTATTACGGC
ACGGATGGACCGTCGGCGAGTTGTGGCATATGATTGTTGAATATTCATCCCAGAGGCTCA
AAAGAGAAACTTTCGAGGGATTCCTGACTTGGTTACTTCCAGAAGACAGCGCCAATAATG
ATGCGGATTACATGTGCGAGTAGCCCAGTTTCGTGAGGTTAGCATCTGTGTGATGTGTGT
TATACTTGTGTGGCTCCGCAACTTTGCAAAAACATCGCTCGGATATTTGTTTCCATGA



Homology of Contig U35_19022 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g62680.15105e-149protein|expressed protein
Brachypodium v1_2Bradi1g01980.15163e-161
Arabidopsis v10AT2G31865.25323e-80| Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2 | chr2:13546790-13549472 REVERSE LENGTH=532