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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4758_PI390587928Hv_44K_v2AGCTCTTATGCTTGCAGACGGTTTGTGTATGCATAGCAAGTGGTATGTTCTGGCAAAAAA660GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5241.4461.1230.8910.4150.446
Raw 2082.4573124.1812094.5732583.208436.579506.052



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3718867709e-22662 - 71610055 / 55plus ABC11253
Harvest35U35_40667313e-25661 - 72010060 / 60plus



Contig Sequence (731 bp)

>U35_4066 731 Hv_44K_v2
ACAGCCATTATCCAAAGAGAAACCCCCACGCCGAAGCGACCCAAGAGAAGAGACCCCCAA
ATGGCGGCCGCATCCATGCTCACCACCGTCTTCTCCCCTCTCGCTCTCCTCCGTCCGTCG
GCCTCCTTCGCGCGGCTGCGCCGCGCAGCTCCCACTGCCGCCGTGGTCGTGCGCGCCGCG
GCCAAGTCTACAGCCGCGGCGGCGGCCCCCAATAAGAAGAGGGCGGCGACCGGCATCACG
ATTCCCCGGCCCGTGTCCCCGGCGCTGCAGGCGTTCATGGGCGCCGCCGAGGTCCCCCGC
ACCGAGGCCATGAAGCGCATCTGGGCCTACATCAAGCAGAACAACCTCCAGGACCCTGAG
GACAAGAAGATCATCGTGTGCGACGAGAAGCTGAAAGCCCTGTTTGCAGGCCGAGAGCGT
GTTGGGTTCCTGGAGGTTGCCAAGCTTCTGAGCCCTCACTTTGTGAAGGTTCCATGAAGC
CTCTTCCGTGGAGTAGTCGAGTTAGCGTAGATGGTTTCTACTTTCTGGTGGTCTCGGCGG
TGCGTAGGTTTGTCTTGTTGGTCCGAGTCGGCTCGACTTCTAGGGTTCTTTTGCTCTCTG
CGGACAATGATGTTAGTGTACTTCTGGCAGTAACAATATGGAACGTCTTTAACAGCTTTA
AGCTCTTATGCTTGCAGACGGTTTGTGTATGCATAGCAAGTGGTATGTTCTGGCAAAAAA
AAAAAAAAAAA



Homology of Contig U35_4066 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None