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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4585_PI390587928Hv_44K_v2CCAAAGATGCAAAACTTGTATGTACAAACTTCTGTAGCACAAGAAGATTCGGTGAATATA10GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_17211.534352e-242220 - 227910060 / 60plus None
MLOCMLOC_17211.1128732e-242206 - 226510060 / 60plus None
MLOCMLOC_17211.431522e-242220 - 227910060 / 60plus None
MLOCMLOC_17211.1030182e-242216 - 227510060 / 60plus None
MLOCMLOC_17211.730482e-242216 - 227510060 / 60plus None
MLOCMLOC_17211.1329572e-242201 - 226010060 / 60plus None
MLOCMLOC_17211.1731222e-242181 - 224010060 / 60plus None
MLOCMLOC_17211.1831332e-242181 - 224010060 / 60plus None
MLOCMLOC_17211.1430122e-242200 - 225910060 / 60plus None
MLOCMLOC_17211.1635282e-242200 - 225910060 / 60plus None
MLOCMLOC_17211.241472e-242221 - 228010060 / 60plus ABC38132
JLOC1JLOC1_11886.724038e-251718 - 177710060 / 60plus
JLOC1JLOC1_11886.529998e-252226 - 228510060 / 60plus
JLOC1JLOC1_11886.328038e-252226 - 228510060 / 60plus
JLOC1JLOC1_11886.229018e-252226 - 228510060 / 60plus
Harvest35U35_336034013e-2511 - 7010060 / 60minus



Contig Sequence (401 bp)

>U35_33603 401 Hv_44K_v2
TTGGCAATGATATATTCACCGAATCTTCTTGTGCTACAGAAGTTTGTACATACAAGTTTT
GCATCTTTGGAGTAGCCTGAGAAGAGTTGTGGACCATGTTTGTGTTATCACATTTATCTA
TCATTTCATTTTGCGTATTCTGCGGCACAATGCTCCTGTCACTATCAGGTACATTATTGT
TTTGGATTTTACTGTAAAACATGTCAACTGCTACATTCACATCTCCTTTTGTCTTCTCAA
GCAAGGAAACTGCAGATTCTCTCGACATGCTGCCATCTACAATCTGAAGAAGCTGGTTTA
CTCCCTGCTTATGTGACTCCACAATGTCCAGTAACTGATTGTCATTTTCCCCATTGTTTT
GATGTGGATCCACTGTTACTTTATTGGATGTCTCACTATAG



Homology of Contig U35_33603 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi2g46780.115152e-63
Arabidopsis v10None