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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4547_PI390587928Hv_44K_v2TTACACTTGCAGCATCTCTGTCTGCTGCTGTTCTCTTTGCATGCATCCTGTATGCTGAAA368GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37681125492e-24381 - 44010060 / 60plus ABC19186
MLOCMLOC_73534.323632e-242133 - 219210060 / 60minus ABC19186
MLOCMLOC_73534.223192e-242136 - 219510060 / 60minus ABC19186
MLOCMLOC_73534.136972e-242152 - 221110060 / 60minus ABC19186
MLOCMLOC_73534.416732e-241481 - 154010060 / 60minus None
JLOC1JLOC1_48960.112798e-251136 - 119510060 / 60minus
JLOC1JLOC1_48961.323538e-25122 - 18110060 / 60plus
JLOC1JLOC1_48961.223748e-25143 - 20210060 / 60plus
JLOC1JLOC1_48961.126688e-25437 - 49610060 / 60plus
Harvest21ABC348856423e-25369 - 42810060 / 60plus
Harvest35U35_389096423e-25369 - 42810060 / 60plus



Contig Sequence (642 bp)

>U35_38909 642 Hv_44K_v2
GCTCAGTCGCGGGCGCGCAGCGAGATCGCCCGCCACGCTCTCCTCCCTCTCCGCCAGGCC
GGAGGCGAACTCCAAGGCGGGCGGCGGTCCGGCGCTCCTGCTCCCCGCAATGCCGGCCGC
TTCCGGCGCAGATCGGGCCGACGACTCCTCCTCACCCTCCTCCTCCTCCCGGCCACCGCT
CTCGATCGGCGCGTGACTCTGGGTGGGCGGCCGGAGGACGGCTGGATCTTGCGGCGGTCG
GCGCGGGGACGGAAGGACGCATCGCTCGATTTCCCGCCTGGCAAGAGAAGAGTGAAGAGC
TGATGAGAAAGCTTGGACTACAGAGTTGAAATCTATTGGCTTCCAGCAAGTCCGAACAAT
GCAGCATCTTACACTTGCAGCATCTCTGTCTGCTGCTGTTCTCTTTGCATGCATCCTGTA
TGCTGAAAGTGCCGATCTGAACTCTGACAAGCAGGCTCTTCTTGCATTTGCTGCATCCCT
GCCCCATGGCAGGAAGCTCAACTGGAGCTCCACGACACCTGTCTGCACTTCTTGGGTGGG
AGTGACATGCACACCGGACAATAGCCGTGTACACACACTACGCCTACCTGCAGTAGGACT
CTTTGGCCCGATACCCTCGGATACACTTGGCAAGCTTGATGC



Homology of Contig U35_38909 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None