barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4525_PI390587928Hv_44K_v2AAATCACAGCTCATAAGAAGGCATACCATGCACAGCTCAACAACTACCATACCGACATGG573GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35899734642e-24703 - 76210060 / 60plus ABC13586
MLOCMLOC_7800.517422e-241082 - 114110060 / 60minus None
MLOCMLOC_7800.316982e-241005 - 106410060 / 60minus None
MLOCMLOC_7800.417792e-241071 - 113010060 / 60minus None
MLOCMLOC_7800.118172e-241131 - 119010060 / 60minus None
MLOCMLOC_7800.219042e-241218 - 127710060 / 60minus None
JLOC1JLOC1_5149.234778e-25665 - 72410060 / 60plus
JLOC1JLOC1_5149.134068e-25590 - 64910060 / 60plus
Harvest21ABC348996393e-25574 - 63310060 / 60plus
Harvest35U35_389176393e-25574 - 63310060 / 60plus



Contig Sequence (639 bp)

>U35_38917 639 Hv_44K_v2
GGGAAGAGGAGGGAGAGGGGATGTCCGCCGGCCAGCCGTGGAAGCGTCCCGCGAACCCGC
ACCCGCACCCGCACCCGCCCAACCACCACCACCAGCAGCAGCACAGATCGAGCAAGCGTC
CGAGGCCCGACCATCCGCCCCGCTCCCCGCTGCTCACCCTCAGCTCCCACATCAACCTCC
GATGGGATGAACGCTCCAAGCGGGCCCTCCCCGCCGACGACCAGATCGGACTCCCCTGGC
GCCACCTCGCCCCCTTCCTCGACTCCCCGCCCAGGAGACCACGCGCCCGAGCCCGAGCCC
TCGCCGACGTCGCCCCCGTCCCCAGGCGGATTTTCTCCCTCGCCCACATCCCTCTCCTCG
GAGGCCTGCTCTCCTACCAGGTCTGGGACGCCTGCCTAACGGAGGCCGACAGGAAGTTCC
TTGCTCGATTTCTTCCGGACGCCGACGCCGAGGAAGCGGTCCAGGATTTGCTCTCAGGGG
AAAATCACCACTTCGGGAACCCTCTCCAAACCTGGTCCTCTGCTCTTTGCTCTGGTGATC
TTCATCCAGACGCTGTGCTTAACAAGGACCAGCAAATCACAGCTCATAAGAAGGCATACC
ATGCACAGCTCAACAACTACCATACCGACATGGCCGAAA



Homology of Contig U35_38917 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None