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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4477_PI390587928Hv_44K_v2AAGAAGAAAAAACCTCTTTTTTGCACGGGCTTGCTGACCACAAGGATCAATTCGGAGCTC382GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35413614123e-21149 - 2089758 / 60plus ABC02379
MLOCMLOC_30977.34533e-21219 - 2789758 / 60plus ABC02379
MLOCMLOC_30977.46113e-21213 - 2729758 / 60plus ABC02379
MLOCMLOC_30977.17823e-21384 - 4439758 / 60plus ABC02379
JLOC1JLOC1_20420.17942e-21371 - 4309758 / 60plus
Harvest21ABC349256393e-25383 - 44210060 / 60plus
Harvest21ABC0239112056e-22267 - 3269758 / 60plus
Harvest35U35_389366393e-25383 - 44210060 / 60plus
Harvest35U35_93411996e-22267 - 3269758 / 60plus



Contig Sequence (639 bp)

>U35_38936 639 Hv_44K_v2
GCATTGCTATCACCCCCGCTAAGATGCATGGTGCTTGGTGCAGGAGAAGGAGCTAGCGGG
CGATGAGATGATCCTTCCAGAGTCCGTCTCCTCCTCCTCTGGTGTCCGCCTCTCGTCTCG
CCTTATCCCTCTCTCCTCCCCCCTTCCCCACTCGACCCACCCATGGCCACCGCCGATGAT
GTCCATCACCTCCACCGCCGGGACCCTGCTCTGCCCGCCGCCCGTCTCCAGGGGCGGATC
GCGCGGAGCGCCCGGAGACGGGGGAGCGGCGGATTCGTCCGAGCAGAAGTCTATGGAGAT
AATGCGCAAGTTCTCGGAGCAGTACGCCCGCAGGTCCAGCACCTTCTTCTGCTCCGACAA
GTCTGTCACCGCCATCGTCATCAAGAAGAAAAAACCTCTTTTTTGCACGGGCTTGCTGAC
CACAAGGATCAATTCGGAGCTCCTCTCTACCCCTGCAGGCATTATGACGACAAGGCCGCC
GAGGCGGCCCAAGACTTCTGGAACTGCCCGTGCGTCCCCATGCGAGAAAGGAGGGCGTTG
TTAATTACCTAGTGTTGGCAGCGAGACAGTGAGAGCTGCAACTCCGACAACCTTGAGGAG
CAACTCCGATTTCCTCTGGCTTAACCATCGTACACATGA



Homology of Contig U35_38936 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None