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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4417_PI390587928Hv_44K_v2ATATGTTGGGATGAACCACAACTGCATTGGGAAAATTCAGTTGGGGGTCAGTTCATCTCG482GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_69007.320163e-221543 - 16019859 / 60plus ABC01064
MLOCMLOC_69007.226983e-222245 - 23039859 / 60plus ABC01064
MLOCMLOC_69007.513993e-221003 - 10619859 / 60plus ABC01064
MLOCMLOC_69007.123773e-221925 - 19839859 / 60plus ABC01064
JLOC1JLOC1_45707.227861e-222269 - 23279859 / 60plus
JLOC1JLOC1_45707.124541e-221937 - 19959859 / 60plus
Harvest21ABC514905883e-25483 - 54210060 / 60plus
Harvest21ABC0106414595e-23970 - 10289859 / 60plusABC01064
Harvest35U35_496495883e-25483 - 54210060 / 60plus
Harvest35U35_1373814595e-23970 - 10289859 / 60plus



Contig Sequence (588 bp)

>U35_49649 588 Hv_44K_v2
CTCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGA
CCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTA
CAACTCTTCAGAGGCTACTCAAGGAACAGAAGCAAGAAAGCAGGATGTATGGTGGGATCG
GTTATTCTCCACTGATATTGCAGAAGCAAGGTTTACTCCAGGATAAAACGGCGACAGCTC
ATCCTTCCATAGTCAATCAGCTCACTTGCCAGGTCATTGACCGATCAAAGGTTGTGATTG
ATGGAAATTTGATTACTGGGAAGGGACTCGGAACAACCATGGATTTTTCCCTGGCCATTG
TAAGAAAATTCTTTGGCCATGGGCGAGCAAAAGGTGTTGCAAATGGAATGGTTTTTGACT
ACACCAAGAGCAGTCACTGTTAGCTATGCTCAAAATTTGAGGTGACTGCCAATGTCCACT
AAATATGTTGGGATGAACCACAACTGCATTGGGAAAATTCAGTTGGGGGTCAGTTCATCT
CGAGATGTTCTGCGCCGATGCGGCATCATGGGCCGCGCGCTCCATGTG



Homology of Contig U35_49649 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g44330.54552e-51protein|DJ-1 family protein, putative, expressed
Brachypodium v1_2None
Arabidopsis v10None