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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4393_PI390587928Hv_44K_v2AACTTCGCCAACTACGGCAAGGGCGGGTCTAACTACGAGAACATGAGCGATCTCTTCGGC331GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_7788.419862e-24470 - 52910060 / 60plus ABC10706 ABC25086 ABC47063
MLOCMLOC_7788.519942e-241546 - 160510060 / 60minus ABC10706 ABC25086 ABC47063
MLOCMLOC_7788.612652e-24865 - 92410060 / 60minus ABC10706
MLOCMLOC_7788.119522e-241486 - 154510060 / 60minus ABC10706 ABC25086 ABC47063
MLOCMLOC_7788.220802e-241614 - 167310060 / 60minus ABC10706 ABC25086 ABC47063
MLOCMLOC_7788.319802e-241514 - 157310060 / 60minus ABC10706 ABC25086 ABC47063
JLOC1JLOC1_5141.219278e-25418 - 47710060 / 60plus
JLOC1JLOC1_5141.119558e-25418 - 47710060 / 60plus
Harvest21ABC515015403e-25332 - 39110060 / 60plus
Harvest35U35_496565403e-25332 - 39110060 / 60plus



Contig Sequence (540 bp)

>U35_49656 540 Hv_44K_v2
CTTAAGAGCCGCTGCCGGCCGATTCACCACGCACACAGACACGGTAGCAATGGCGACGGG
AATAGCAGAGTGCTCTCCGTCCTTCTTGGTCGCCGCCGGCCTCGCGGTGCTGGCGATCTG
CTCGTACCTCGCCGTCGTCCTCGGCCGCGCCGGAGCGAAGCGGTGCGCCCCCGCGGTCGG
CACGGTGTTCCACCAGGTATACCACCTCCGGCGGCTCCACGACTACTACACGGACATGTT
CCGCGAGCACATGACGTTCCGGCTGCTCTCCCCGGGACGGGGCCAGATTTACACGTCCGA
CCCGGCGGTGGTCGAGCACATCCTCAAGACCAACTTCGCCAACTACGGCAAGGGCGGGTC
TAACTACGAGAACATGAGCGATCTCTTCGGCGACGGCATCTTCGCCGTGGACGGCGACAA
GTGGAAGCAGCAGAGGAAGATCGCAAGCTACGACTTCTCGACGAGGGCCCTCCGTGACTT
CAGCGGCGGCGTCTTCAACAAGAACGCCGCCAAGCTCGCGCACATCGTCTCCAGCAACGC



Homology of Contig U35_49656 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os10g38110.15168e-69protein|cytochrome P450, putative, expressed
Brachypodium v1_2Bradi3g31697.15188e-81
Arabidopsis v10None