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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4329_PI390587928Hv_44K_v2GATGCAGTTCTTGATGTATGTTATCTACGAGAGTCTATGCTTCAGGGTGAATCGAAAAAA1074GeneList: purple
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3290.4551.1251.5220.6401.560
Raw 2.9209.41323.99644.2246.18519.922



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37280711489e-221079 - 113310055 / 55plus None
Harvest35U35_862011453e-251075 - 113410060 / 60plus



Contig Sequence (1145 bp)

>U35_8620 1145 Hv_44K_v2
GTTTCAACCACTCTGACGCGTCGCCTTTGCTCCTTCAGCTCTTCAACAACATAAGTAGTA
CTTTCCACTACATCCTCTCCTGGCCGGGACGGGCCGGGGAATCATAGCACAGTCTGGTGC
CTTCCTACTTGGCGATCGAGGCCGATCATGGAGCTCGTGAACACGATCTTCGACGTGGCG
CTGAAGATCGCCAAGGCGGTGGAGACGGCCCGCGAGAACAAGGCGATGTGCCTGGACCTC
GCCGACCGCGCGAGCACCATCTGCAACATCCTGCGCCAGGACCGCGACTCCGGTGCAATC
ATGACGGCTGGCGGCGGAGACAGCCAGGCCAGCCAGATAACGAGGCACACGCTGGAGAGG
CTGAAGGCCGCCCTCGACGACGCGCTGGACCTCGTCGAGTCCCAGAGGCAGAGCGGCGTC
ATCGAGCGGGCCGTCGCCTCCTTCACCGTCGATGTGGCCCGGAAGTTCCAGCTCCTCCAG
ACGAGGATCTCCGACTGCGTCAACGACCTCAAATACGCCAAGCTGGTCGCTGCTGACCAC
CGTGCTCAGGATGACAACACAAGAGCTGCGCCCCTGAAGCCGTCGTCGTTTCCGAGGCCG
TCGGATCTGGTGAAGCAGCTGCAGCCGCCGCCCCTGCCGAAGCCGTCGTCGTTTCCGAGG
CCGTCGGATCTGGTGAAGCAGCTGCAGCCGCCGCCCCTACCGAAGCCGTCGTCGTTTCAG
AGGCCGTCGGATCTGGTGAAGCAGCTGCAGCCGCCGCCCCTGCCGAAGCCGTCGTCGTTT
CAGAGGCCGTCGGATCTCGTGAAGCAGCTGCAGCCGCCGCCCCGAGGCCGTCGGATCTGG
TGAAGCAGCTGCAGCCGTCGCCCCCGAGGCTGTCGGATCTGGTGAAGCAGCTGCAGCCGT
CGCCCCCGAGGCTGTCGGATCTGGTAAAGCAGCTGCAGCCGTCGCCCCCGAGGCTGTCGG
ATCTGGTGAAGCAGCTGCAGCCGTCGCCCCTGCTGAAGCCGTGGGTGCGGTAGCGAAGTC
CTTGCAGAAGTACACAAGGACGCCGCGGCAGCAAGGTCGTCGAGTCTTTGATGTGATGCA
GTTCTTGATGTATGTTATCTACGAGAGTCTATGCTTCAGGGTGAATCGAAAAAAAAAAAA
AAAAA



Homology of Contig U35_8620 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None