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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4328_PI390587928Hv_44K_v2AGTGCAGGACATAGTACATGCTATGATGCTAAGTCCATATATAATACATTCCTTATTTCC522GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_68036.230452e-24629 - 68810060 / 60plus ABC18979 ABC42436
MLOCMLOC_68036.140512e-241689 - 174810060 / 60plus ABC18979 ABC42436
MLOCMLOC_68035.47772e-24688 - 74710060 / 60plus ABC18979
MLOCMLOC_68035.221422e-24753 - 81210060 / 60plus ABC18979 ABC42436
MLOCMLOC_68035.111252e-24831 - 89010060 / 60plus ABC18979
MLOCMLOC_68035.37613e-21678 - 73110054 / 54plus ABC18979
JLOC1JLOC1_44976.124408e-252172 - 223110060 / 60minus
JLOC1JLOC1_44975.111628e-25756 - 81510060 / 60plus
JLOC1JLOC1_44975.210182e-21618 - 67110054 / 54plus
Harvest21ABC189796043e-25524 - 58310060 / 60plusABC18979
Harvest35U35_86216033e-25523 - 58210060 / 60plus



Contig Sequence (603 bp)

>U35_8621 603 Hv_44K_v2
CTCGCTAGCGCTCTATGGAGCTTATAGGACTACACAGGAGCTTGCATCCAAAGAACAAGA
ACACAAGTCACAATTGATGGGGAGTCTGTTAACTGAAAGAGAAAAGAATGAAATCATGCA
AAAGCAACTTGAAGCTCTTTCTTTCCTAGATAAAAGAAAGGCAACAAAGCCAAAGCTGCT
GGCTGATCAGGTTTCAAGTGTGTCTGCTGTGACTCTGGGCTCTGATCAAGTTACAGCTCC
TGTGCGGCAGCAAATATCAGTACCTTCACCTAGTAAAGCCCCTCCAGCTAAAGCCACAAA
GAGGGTAGCCCCCACGTCTCGGAGGGCAAGGGTGCGAGGAGCTCTGCTGCAAGATAACGA
GGATGAGGATGATAATTGACAAAAAGCTAGAGATGCTGATATCTTGGTTTAAGTTTGCCA
CATATGTGAACCTACAAAGAGTGGCTTGTGGTTAGTCAGTTTTCTGTCTGTTTTAACTCG
TCTCAAACTTGGAGATGAACTAATTGCAGTTCATGGTATGAAAGTGCAGGACATAGTACA
TGCTATGATGCTAAGTCCATATATAATACATTCCTTATTTCCGTATAAAAAAAAAAAAAA
AAA



Homology of Contig U35_8621 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None