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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_425_PI390587928Hv_44K_v2CCTTGTCTGTTACCGTTTGAATGAATGAGATGAACTCCGCTATGAATTATCCGTAAAAAA375GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK253120.19743e-22821 - 87610056 / 56plus ABC01361 ABC08382 ABC08383 ABC34343 ABC47231
MLOCAK249007.16353e-21582 - 63510054 / 54plus ABC01361 ABC34343 ABC47231
MLOCAK248688.125383e-212485 - 253810054 / 54plus ABC01361 ABC03967 ABC03968 ABC34343 ABC47231
JLOC1JLOC1_3101.113406e-21383 - 4389855 / 56minus
Harvest21ABC343434463e-25376 - 43510060 / 60plusABC34343
Harvest21ABC013615383e-25468 - 52710060 / 60plusABC01361
Harvest21ABC013608813e-25809 - 86810060 / 60plus
Harvest35U35_383894463e-25376 - 43510060 / 60plus
Harvest35U35_1425510053e-25834 - 89310060 / 60plus



Contig Sequence (446 bp)

>U35_38389 446 Hv_44K_v2
GGGGCAACGGCACCGGCGGCGAGTCCATCTACGGCGAGAAGTTCGCCGACGAGAAGTTCG
TCCACAAGCACACCAAGCCAGGGATCCTCTCCATGGCCAACGCCGGGCCCAACACCAACG
GCTCCCGCAGCGGTATCNGTTCCAAGCAGGTCGTCATCGCCGACTGCGGCCAGCTCTAGG
TCCGTCCGCCCGTCGCGCTCGCCCGTCGTCGTCGTCGTCGTGCCATGTGTCCCCTGTCGT
GTCGTCGGTCTAAATAAGAAGTCGTGTCGTGTCTTGCCCCTGTCCGTCCGATGAGATCTC
CGTGGTTGGTTTAGGAGGGTTTTAGGTGGACTCTTTAGGCTGCTGGATCTGCGTCCGGCC
GCCATGGTTATCTTCCCTTGTCTGTTACCGTTTGAATGAATGAGATGAACTCCGCTATGA
ATTATCCGTAAAAAAAAAAAAAAAAA



Homology of Contig U35_38389 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None