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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_42239_PI390587928Hv_44K_v2TTGTCTTGCTGGTGGCAGACGAGGAAACACAAAATAGAAGATTGCTCGCCTGGATTTACT490GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.6811.3561.0650.7600.2920.364
Raw 89.76797.81976.98081.38011.41415.465



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC320575543e-25491 - 55010060 / 60plus
Harvest35U35_367635543e-25491 - 55010060 / 60plus



Contig Sequence (554 bp)

>U35_36763 554 Hv_44K_v2
GCGAGGACCTGCTCTCCGAGGTCCTCCTCCGCCTCCCGCCTCAGCCGTCCTCCCTCCCGC
ACGCCTCCCTCGTGTGCAATCCATGGCGCAGCCTCGTCTCGGATCCGGGCTTCGTCGGCC
GCTTCCGCCTCCACCACCGCCGTAACGCCCCCCTTCTCGGTTTCTTCGGTATTAGTTCAA
GTCTTCGCCACATCGACTTCGTACCCACCATGGATTCTCCCAATCGTGTCCCCCAGTTCA
GCTTCTCTTTGCCCGGCGAAGGCTACGGCGCGCTCCTTGGATGCCGCGATGGTCTCGTCC
TCACTCTCCGCTTACCCTGGACGTGCCCCCGGGAAACACCAGAGGCATCATGGCGTCCGG
TCCTGGTGTGGGATCCTGTCAGCGGCAACCAGCACCGCATTGCCCTACCCCCGACCTCCG
ATGATGCTAAGATCTCGTGGTGGATCAGTGGGGGCGGTGCTTCGCTGTGCCGGATTAGTC
CACTTCCAGGTTGTCTTGCTGGTGGCAGACGAGGAAACACAAAATAGAAGATTGCTCGCC
TGGATTTACTCGTC



Homology of Contig U35_36763 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None