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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_42132_PI390587928Hv_44K_v2TTCTCCCCTCCCTTTTCAATGCAATGAAACGCAAAGGCTTTTTGCGTTTTCTCGAAAAAA1230GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_5857.313232e-241206 - 126510060 / 60plus ABC14798
MLOCMLOC_5857.221772e-24617 - 67610060 / 60minus ABC14798
MLOCMLOC_5856.680322e-246578 - 663710060 / 60minus ABC14798
MLOCMLOC_5857.129332e-24904 - 96310060 / 60minus ABC14798
MLOCMLOC_5856.477472e-245929 - 598810060 / 60minus ABC14798
MLOCMLOC_5856.577382e-246481 - 654010060 / 60minus ABC14798
MLOCMLOC_10790.18116e-2471 - 12910059 / 59plus None
MLOCAK37652441323e-211655 - 17159759 / 61plus None
MLOCMLOC_45207.123253e-2142 - 1029759 / 61plus None
MLOCMLOC_45207.224463e-2128 - 889759 / 61plus None
MLOCMLOC_45207.419883e-2120 - 809759 / 61plus None
MLOCMLOC_45207.321953e-2128 - 889759 / 61plus None
MLOCMLOC_2174.143123e-214158 - 42189759 / 61minus None
MLOCMLOC_2174.243093e-214155 - 42159759 / 61minus None
JLOC1JLOC1_3795.218218e-251394 - 145310060 / 60plus
JLOC1JLOC1_3794.121668e-25369 - 42810060 / 60minus
JLOC1JLOC1_3795.117108e-251283 - 134210060 / 60plus
JLOC1JLOC1_7084.16643e-24568 - 62610059 / 59minus
JLOC1JLOC1_20659.12082e-2199 - 1589758 / 60minus
JLOC1JLOC1_1308.442952e-214147 - 42079759 / 61minus
JLOC1JLOC1_1308.343022e-214154 - 42149759 / 61minus
JLOC1JLOC1_1308.243022e-214154 - 42149759 / 61minus
JLOC1JLOC1_1308.143032e-214155 - 42159759 / 61minus
Harvest21ABC1479813143e-251183 - 124210060 / 60plusABC14798
Harvest35U35_2039313623e-251231 - 129010060 / 60plus



Contig Sequence (1362 bp)

>U35_20393 1362 Hv_44K_v2
CACTCCTATAGGGCGAATTGGGCCCTTTCCATGATGCTCGAGCGGCCGCTAGAATACCTT
CTCGTTTCTGCGCGGCAAAGCCAAAGATAAGCTTCCCGGCGAGCAAGACACTTGGTCAGG
TGAAAGTCAGCATGCTTGGTGGAAGCCCTCTCGCTCAGCAGGGGGAAATAACTACATAAG
TTGCACAATATGCTGATCATGATGACGACAATGACGAAAAACTAAGTATGGTAGCTAAGA
AGTTGATGAGGATGATGAAAAGAGTGGTCAATCTTTCTGCATTGCTGCTTACTCTGGTAT
GTAAGCGTACTATACTTAATTAGTAGCTAGGCAATGTAATGAACGTGTATGGGTGAGCAG
TAGTGCGTATTGTTTTGGACTAGCAGCATGCAAGTAGCATCTGGCCAGCCAAGGTGGTTG
ATTCCATCTTCCTAGTATAATCAATAAATTCAGCTCTGAAATATTGATTTCAAATGCTGT
GGTGCCAATATGATAGTGAATCATCTCTATTGATGTTCAAATTGTCCCTGAAATGCAAAA
TGTGCATGAATGGTGCTAATGTGCATTAACGGTGCCAATATGATAGTGAATCTTCTCTAT
TGATGAGCGGCCGCTACCCTCTGGATCGCACACAATGTACCTTACTTGTTATACTTGTGG
ATGACCCAGAAATGGCTCCCTTCTTCTGCGGCAGCCATGCATCATCCTGAAATATTTAGC
AAACATGATATGGAGGTGATTCAGAAGATGATGGCAATGCCAAGAACCATTGAGAATAAA
TCAAGGCAGCAAGGAATTTATGAATCTATCCATCGAGATTTACTAGTTGCTTTTGGGAAT
TGGGAGTTCGATCCAATGAATATTTCAAATCCATTTCCTACAAATGAGGGTTCTGTACAC
ATCTGGCAAGGATATGAAGATAGGTTGGTGCTGGTTGAGCTGCAGCGGTACCTTTCAAAG
AAGCTTCCATGGATCCAGTATCATGAAGTCCAAGAAGGTGGACATATGTTCATGCTGGTG
GATGGATGGACCGATAAAATTATCAAGGCGCTCTTGGTAGGAGAAGAGGCATCACCGATG
TGACTAAAGATTCATCTTTGAGCTGTTACTGGGCAGTGCAGATGCTACGAACTTCTTTCC
CCCAAGTTTTATCCCGTGGGACACCAAATTTGTCCAGTTCAAAAGATGATAGATCATACT
TCACTTGCTCACTGGCCTCTTAGGAGGATGTTCTCCCCTCCCTTTTCAATGCAATGAAAC
GCAAAGGCTTTTTGCGTTTTCTCGAAAAAAACTATTGTTCTCCAGTACATTGAAATTACA
ATATGTGAAACCTTGTTGCTTGTTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_20393 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os12g05600.13444e-90protein|hydrolase, alpha/beta fold family protein, putative, expressed
Brachypodium v1_2Bradi4g42337.13484e-100
Arabidopsis v10None