- Probe CUST_42010_PI390587928
- Source Contig U35_47771
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_42010_PI390587928 | Hv_44K_v2 | GGGATCATATACTCGTGACGATAGAAATGACCTTCGTGGTGCTGATAAGGGTTCCAAAGA | 470 | GeneList: cyan MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 1.959 | 1.622 | 1.216 | 0.584 | 0.332 | 0.189 |
| Raw | 228.782 | 258.507 | 192.823 | 136.181 | 30.559 | 18.311 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_38330.13 | 887 | 2e-24 | 576 - 635 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.10 | 954 | 2e-24 | 642 - 701 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.9 | 1008 | 2e-24 | 697 - 756 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.4 | 1262 | 2e-24 | 960 - 1019 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.1 | 1282 | 2e-24 | 969 - 1028 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.2 | 1281 | 2e-24 | 965 - 1024 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.16 | 819 | 2e-24 | 510 - 569 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.11 | 1024 | 2e-24 | 715 - 774 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.5 | 1259 | 2e-24 | 960 - 1019 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.12 | 941 | 2e-24 | 629 - 688 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.15 | 823 | 2e-24 | 512 - 571 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.14 | 875 | 2e-24 | 559 - 618 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.3 | 1279 | 2e-24 | 966 - 1025 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.7 | 1214 | 2e-24 | 903 - 962 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38329.2 | 1353 | 2e-24 | 1040 - 1099 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38329.3 | 1464 | 2e-24 | 1154 - 1213 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38329.4 | 1377 | 2e-24 | 1064 - 1123 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.17 | 790 | 2e-24 | 487 - 546 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.8 | 1125 | 2e-24 | 814 - 873 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_38330.6 | 1256 | 2e-24 | 954 - 1013 | 100 | 60 / 60 | minus | None |
| JLOC1 | JLOC1_24915.33 | 1224 | 8e-25 | 196 - 255 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.32 | 1225 | 8e-25 | 349 - 408 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.30 | 1384 | 8e-25 | 352 - 411 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.29 | 1373 | 8e-25 | 341 - 400 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.28 | 1379 | 8e-25 | 344 - 403 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.27 | 1344 | 8e-25 | 333 - 392 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.26 | 1328 | 8e-25 | 285 - 344 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.25 | 1314 | 8e-25 | 285 - 344 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.24 | 1160 | 8e-25 | 281 - 340 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.22 | 1288 | 8e-25 | 256 - 315 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.21 | 1285 | 8e-25 | 256 - 315 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.20 | 1282 | 8e-25 | 256 - 315 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.18 | 1280 | 8e-25 | 254 - 313 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.17 | 1283 | 8e-25 | 248 - 307 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.16 | 1263 | 8e-25 | 251 - 310 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.14 | 1258 | 8e-25 | 246 - 305 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.13 | 1288 | 8e-25 | 245 - 304 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.12 | 1273 | 8e-25 | 248 - 307 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.10 | 1138 | 8e-25 | 245 - 304 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.9 | 1112 | 8e-25 | 237 - 296 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.8 | 1348 | 8e-25 | 227 - 286 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.7 | 1252 | 8e-25 | 224 - 283 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.6 | 1154 | 8e-25 | 36 - 95 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.5 | 1065 | 8e-25 | 36 - 95 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.4 | 1050 | 8e-25 | 35 - 94 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.3 | 1057 | 8e-25 | 31 - 90 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24915.2 | 1064 | 8e-25 | 29 - 88 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC49154 | 533 | 3e-25 | 471 - 530 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_47771 | 533 | 3e-25 | 471 - 530 | 100 | 60 / 60 | plus |
Contig Sequence (533 bp)
>U35_47771 533 Hv_44K_v2 GAGAAGAGTGGATCCTATACTCGTGATAACAGAAATGACTACCGTGATGCTGATAACGGT TCCAAAGAGCAAAAGAACTACCCAGCTGCTGGAAAGAGAAAGGAAGAGCACCAGGCAAGT TTACCAAGACAATCCAAGGAACATGATGAACATAAGAAGAGGGGATCCTATACTTGTGGT AACAGAAATGAGCACCGTGATGCTGATAATGGTTCCAAAGAGCAAAAGGACTACCCAACT GCTGGAAAGAGAAAGGAAGAGCACCAGGCAAGTTTGCCAAGACAATCAAAGGAACATGAT GAACATAAGAAGAGGGGATCCTATACTTGTGATGACAGAAATGAGCACCGTGATGCTGAT AATGGTTCCAAAGAAAGGCAAAAGGACTACTCAGCTGCTGGAAAGAGAAAGGAAGAGCAC CAGGCAAGTTTACCAAGACAATCAAAGGAACATGGTGCGCATAAGAAGAGGGGATCATAT ACTCGTGACGATAGAAATGACCTTCGTGGTGCTGATAAGGGTTCCAAAGAGCG
Homology of Contig U35_47771 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |