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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41932_PI390587928Hv_44K_v2CACACGCGGACATGAAAATGTATTGCCCTTTTATAACTTGGTAGTTTTGTGAAGTGAAAA461GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_56151.240903e-222188 - 22469858 / 59plus ABC04782 ABC29956
MLOCMLOC_56151.341123e-222188 - 22469858 / 59plus ABC04782 ABC29956
MLOCMLOC_56151.436553e-221807 - 18659858 / 59plus ABC04782 ABC29956
MLOCMLOC_56151.134233e-22922 - 9809858 / 59plus ABC04782 ABC29956
JLOC1JLOC1_36296.123521e-221828 - 18869858 / 59minus
JLOC1JLOC1_36295.232331e-22807 - 8659858 / 59plus
JLOC1JLOC1_36295.129771e-22807 - 8659858 / 59plus
Harvest21ABC299566063e-25462 - 52110060 / 60plusABC29956
Harvest35U35_301856063e-25462 - 52110060 / 60plus



Contig Sequence (606 bp)

>U35_30185 606 Hv_44K_v2
GTTTGGCAAAAACGCTGCATATCTGAAAGATGAGATGAAGGTAACTCTACAATTCTTTGA
TGGTCGGGCATTATCTGGCTCAGTGCCTCCTCGTGTGACTTGCACTGTTGTTGAAGCACA
GCCTAATGCAAAAGGCCTAACTGCTACACCTCAATATAAAAGGGTCTTGCTGGATAATGG
CCTTACAGTGCTTGCCCCACCTTTTGTTGAAGTGGGTGAGAACATCGTTGTTAGTACTGT
GGATGATTCATATATGACGAGGGCCTAAGGGTGGTGTCATATGGTGCTTTGTTCTCCGAA
ATTGGGATTCGACTTGTACTCGACTTCTCTTAGATAAGTTTGCTAGGCCGTAGACATAAT
TCTGTATCTGCCTCCACAAAAAAGGCATCCAGTTTTACCAGGAATTCAGTAACCAACAAC
ANNATTTTTGTTCTTACAGATATGTTATNGGGGAAGCGATGCACACGCGGACATGAAAAT
GTATTGCCCTTTTATAACTTGGTAGTTTTGTGAAGTGAAAAATACTGGNGTTGTGCTCAA
TATGTGCAAAACGCCAATCATATATCANTAAGAAGTTATATTGCTGTTCAAAAAAAAAAA
AAAAAA



Homology of Contig U35_30185 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None