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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41741_PI390587928Hv_44K_v2GTTAAAGGAAAAAAGATTACTCGTGCTGATGGTAGCCCTGGAACATTGTATCTTAAAAAA686GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0691.2511.2641.0480.5810.532
Raw 66.527116.332107.017131.86028.59326.691



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_18583.24829e-22337 - 39110055 / 55plus None
MLOCMLOC_18583.34029e-22334 - 38810055 / 55plus None
MLOCMLOC_18583.124649e-222190 - 224410055 / 55plus ABC35034
JLOC1JLOC1_12856.110485e-22942 - 99610055 / 55plus
Harvest35U35_240387573e-25687 - 74610060 / 60plus



Contig Sequence (757 bp)

>U35_24038 757 Hv_44K_v2
ACGAAAGGATGAGCGTAATGCACCAGGTGGGTGGTGTTGATGCATTGTCTGCAACAAGTC
ATGACAGTAAATCCAGACCAAAATCAGAAGCTGGTAATGCAAATGTAGAGAAATTGCTGT
CTCAAATGCATGATCTATCTTTTATGTTGAAAGACGAACTTTCAATCCCTTCTAAGTCAG
CAGATCGCTCCGAGTCCTGAAAGTTGCTGAGATTCATAGCAACAATGTGCTATTTGCTAT
ACCAGGATGGACAGCATTCTGGAGCTCCAGCCTTTCGATTGCAGAACCAACCACATCAAT
TATCTTACCTGGTAAATTTACGTGGCGAACAATCCTTCTTTTTCAATGGATGTCTCTTTT
ATATCAGTAAACTGATCGGTGGAGAATTCTAGCAATTTTCTGTTACATTGATCGAAAGAG
GATTCTTGCAATTTTCCCTGATGATTTGTCCCATTAGTTAGGAGAGAACTCAGATCCTGA
GCCCACATTGTAATAAGTTTTTTTTTTCTTACTGCTGAGTTGAGGCCTGAGTCGTTGGTT
TTGTTGTGTATGTATCATTTCCGAGCCTTTATATGTTGTATACGTAAACCGAAAACAAGA
TGCCCAGCCTATTCTGTGTTTTTCTTTTCTTGATTGAAACCATTCTGCTCTTTTTCGAGG
TTGACGGCAAGAAACTCGTGCTGGTTGTTAAAGGAAAAAAGATTACTCGTGCTGATGGTA
GCCCTGGAACATTGTATCTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_24038 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None