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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41687_PI390587928Hv_44K_v2TTTTAGTCATTTGCTGCACGCACACGTGCAGCCAGAAGTTGAGAAAAGGAGCTTTTTTGC149GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35971315823e-211355 - 14149758 / 60plus ABC15563
MLOCMLOC_52518.218783e-21271 - 3309758 / 60minus ABC15563
MLOCMLOC_52518.317283e-21154 - 2139758 / 60minus ABC15563
MLOCMLOC_52518.118103e-21288 - 3479758 / 60minus ABC15563
JLOC1JLOC1_33661.118642e-211412 - 14719758 / 60plus
Harvest21ABC155635666e-22210 - 2699758 / 60minusABC15563
Harvest35U35_491203813e-25150 - 20910060 / 60minus
Harvest35U35_199305906e-22322 - 3819758 / 60plus



Contig Sequence (381 bp)

>U35_49120 381 Hv_44K_v2
TTTTTTTTTTTTTTTTTGGGGTTTTTTTCTTTTTTTTTGGGGGGTAAAGTTACATCAGAC
CAGGTTTCACCTCGACCCCATTGTCCACAGACGAACGACAAACTTGCAATTGACACCAGA
AAGACCAACCTAAGGCAAAATCCAAACAAGCAAAAAAGCTCCTTTTCTCAACTTCTGGCT
GCACGTGTGCGTGCAGCAAATGACTAAAACCCGTCTTACGCTCCTTCTGCTAGGTTGATA
GACCAAAACTGAGCTCAAAATGACTAGAGTACATCAATCCATCAATGGATAGAGCAATGT
GGCACATGAAACAATGGTAGAAAGGCGGTCACTTCATAGCATTTCGGCAATCTGGACAGC
GTTCAGCGCCGCACCTTTACG



Homology of Contig U35_49120 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None