- Probe CUST_41680_PI390587928
- Source Contig U35_49124
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_41680_PI390587928 | Hv_44K_v2 | CTCCGTCGGCTCGTCCTGTTGCAGGCCTAGAGTTTCTTTTCTCTTTTTGCAATCAATGGG | 0 | GeneList: darkred MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.858 | 1.448 | 1.754 | 1.206 | 0.561 | 0.574 |
| Raw | 181.818 | 477.277 | 509.175 | 531.971 | 89.718 | 99.381 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_49124 | 240 | 3e-25 | 1 - 60 | 100 | 60 / 60 | minus |
Contig Sequence (240 bp)
>U35_49124 240 Hv_44K_v2 CCCATTGATTGCAAAAAGAGAAAAGAAACTCTAGGCCTGCAACAGGACGAGCCGACGGAG GCCCTAAACCTCCTTGCCGAGGACCCTGCACCGAACCATGCTGCCGGCGGGGCCCCAAAC AAATTGGAGGTAGGCCCACGGCTCGCCGGGCGCCATCCGTTTGTGCAGGTAGCAGTCAAA CGTCCGGCGCTGCACGTGCTCGTCCGCGCACATCTCCACCAGCGCTTCGGGCCCGGGGTT
Homology of Contig U35_49124 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |