- Probe CUST_41653_PI390587928
- Source Contig U35_49134
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_41653_PI390587928 | Hv_44K_v2 | TTTGATTGATTGTAGCTTCATCGTTGTGTAGTTGGTTCATCATTTCAGCCCTGCAAAAAA | 11 | GeneList: greenyellow MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 3.827 | 2.579 | 1.250 | 0.573 | 0.187 | 0.192 |
| Raw | 1378.631 | 1411.852 | 613.706 | 454.414 | 51.286 | 58.177 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_49134 | 348 | 3e-25 | 12 - 71 | 100 | 60 / 60 | minus |
Contig Sequence (348 bp)
>U35_49134 348 Hv_44K_v2 TTTTTTTTTTTTTTTTTGCAGGGCTGAAATGATGAACCAACTACACAACGATGAAGCTAC AATCAATCAAAAGGACAGACAGGGAGCACCGGCTGATGTGCAAAGGCGGTGCACGCGACC AGGAGGACTCGCGGCAACCTGGCGTTACACATGACTCGGCGCACAAACGGACTACAGTCA GCAACTCTCATCAGATCAGAGAGCGGAGTCGGCACGACGGTGGCGCTTGCCGTGCCTGCG CCGGTCCGACGACCTGGCCTCGCCCGAGGGGAGGTACATGGCCGCCTCGGCGCCCACCCT GCACTCGGGCAGCGGCGCAGGGTACCGCGCGCGGTCGTAGCAGTACCC
Homology of Contig U35_49134 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |