- Probe CUST_41652_PI390587928
- Source Contig U35_49135
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_41652_PI390587928 | Hv_44K_v2 | GCCTTCTATTCTTTTATGTGTTTGTAAACATGTCAGCAATTTTACATAGCACCATGGCAT | 80 | GeneList: red MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.955 | 1.986 | 2.051 | 0.825 | 0.239 | 0.270 |
| Raw | 350.697 | 1110.333 | 980.065 | 637.042 | 61.237 | 78.194 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_49135 | 178 | 3e-25 | 81 - 140 | 100 | 60 / 60 | minus |
Contig Sequence (178 bp)
>U35_49135 178 Hv_44K_v2 TTTTTTTTTTTTTTTTTAAGGCTAAACCTACAAAGATTTATAATAATAATACTTCATATT AACAATGCCACACAAAAAAAATGCCATGGTGCTATGTAAAATTGCTGACATGTTTACAAA CACATAAAAGAATAGAAGGCTTTTCCTCCCATGGAACAACAATCACCCACTCACACAG
Homology of Contig U35_49135 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |