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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41474_PI390587928Hv_44K_v2CATGATGAGCCTGTGATTTCAAACGTACCCCCTTCAAAGAATATAGGAGTTCTTGGTAAA773GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.1461.3671.2150.8500.2470.210
Raw 854.762861.411661.216726.96076.19869.764



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC019629503e-25886 - 94510060 / 60plusABC01962
Harvest35U35_7468383e-25774 - 83310060 / 60plus



Contig Sequence (838 bp)

>U35_746 838 Hv_44K_v2
GGGGAAGCCGCGCCGCCGCCGCAAACCCTAGCTAGAGCCTCGCCTCCCTCCTCTCCCCCT
CCCGGGCGCCTCCACCCTCCGCCCAGCGGCGCGAAGCGACCATGACGTTCAAGCGGAGGA
ACGGCGGGCGCAACAAGCACGGCCGCGGCCATGTCAAGTACATCCGCTGCTCCAACTGCG
CCAAGTGCTGCCCCAAGGACAAGGCTATCAAGCGTTTCTTGGTGAGGAACATTGTGGAGC
AGGCTGCTGTGAGAGATGTGCAGGAGGCTTGTGTGCATGATGGATATGTTCTCCCCAAGC
TGTATGCCAAGGTGCACCACTGTGTTTCTTGTGCCATCCATGCTCACATTGTCCGTGTCC
GCTCCCGTGAGAACAGGAGGAACCGTGAGCCCCCGCAGCGTTTCAGGCGCAGGGACGACG
GCCCTAGGCCTGGACAAGGTGGCCCGCCCCGTGCTGGAGGCCCTGGTGGACCTGGTGGTG
CGCCTGCTGGCGCTGGCGCTGTTCCTGGCGCCCCTGCTCCCCGTGCATTGATCTAGTTTG
GGAATATGCTTCCGTGATGGTGCCAGCCCTAGTTTTACTCATCCCTGGATATTGAACTAT
TCTAGTTTTTGCTGCAATCGGTTGTACTGAAAGTTGGTTGGTCAAGCACAATTTGTGATC
AGGTCTTTATATTTTGACAATTTCGCTGCTATCTATATCAGAGAGAACCTTTTGGTTTAA
AAAAAAAAAAAAAAAGGTTTTGTCTTCATGCCCTTATATTTTAGTTCACCATTCATGATG
AGCCTGTGATTTCAAACGTACCCCCTTCAAAGAATATAGGAGTTCTTGGTAAAAAAAA



Homology of Contig U35_746 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None