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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41375_PI390587928Hv_44K_v2TCACACTGTCTATATATGTAACTAGAAGCATACGCGCGCTTCGCTGTGCTGATCTTCGAT804GeneList: purple
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2410.8350.9851.3300.8961.532
Raw 23.057133.623130.518292.36861.576120.086



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_72636.233172e-243110 - 316910060 / 60plus ABC16257 ABC16258
MLOCMLOC_72636.120802e-241992 - 205110060 / 60plus ABC16257 ABC16258
JLOC1JLOC1_48318.119908e-251902 - 196110060 / 60plus
Harvest21ABC162575363e-25440 - 49910060 / 60plusABC16257
Harvest35U35_70459013e-25805 - 86410060 / 60plus



Contig Sequence (901 bp)

>U35_7045 901 Hv_44K_v2
GGTCCTCAGCTTCAAGGGAAGAGGCATACAAAAGAATTATGATATCAATGCACTTTGGAG
TATCGTGGCGAGAAATGGACAATATCTCACATATATCGGAGCGTTGGTGACTCTGCAGAT
ATTTCTGCAGATAAACAGAGTGAACACCACCACTTCCCTGCTGCCAATGCTGTTTCAAAC
AACAAGTTCCAGGAGCAAAGCTGCGGTTTTCAGCAAGATGGTGATAATTCTGATTAACTC
ATGTGGCATTCTTGGATCCGCCTTCACGACAAAACATCACGGCCGTGCGGCAACATTAAC
CGTCAGCATTGTTCTAATGGTATTTTGCCAGATGGCGATTCCATCGATCGTCGAATTCCA
CATGGGGCTTGGCGGTGGAAGCCGAATGCCTCGAATGTACACCACTGCGATGTTCTTGCT
CACCTGCGTCGTCTCCTGCGGCCTCAGTTGGTCATGGGGCTCTATGTTCTGGACCATTCC
TGGTAAAAAGGTCCACTCGGCTGGTCAGCTTCTGGGCATGGCTCTGAATTTCGCCCTCTG
CTTCGCCCAGATGCAGTACTTCCTGATGATGCTGTGGCGGCTGAAGAATGCCATCCTTGC
CTACTATGCCATGTGGATTTGGTCATGATTAAATTAGGTTCTGCACATAAACCATGGCCA
GGTGATTGTGCCGTGGAGTAGCTTAGTGTATCTACATCTGATGTCATCCTTTTTCTTGGA
CATATTTTTTGTATAGTTTTTTTCCGGTAAGAACCTTCCCAGATGGTTCTCCTGTTAGCT
TGCAGGGGTCGTATCTGTAGTTGGTCACACTGTCTATATATGTAACTAGAAGCATACGCG
CGCTTCGCTGTGCTGATCTTCGATGTGGCGATTTTCCCTTACTTAAAAAAAAAAAAAAAA
A



Homology of Contig U35_7045 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g36490.23942e-93protein|expressed protein
Brachypodium v1_2Bradi3g46650.14038e-106
Arabidopsis v10None