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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41353_PI390587928Hv_44K_v2TAGGGGTGTGGCTGAGCTGGGTATGCATTTATCCATAACCCCCTGTTTGGATGTAAAAAA751GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.6311.5221.1590.8240.2160.484
Raw 59.36287.09957.19062.9934.98414.839



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC162618213e-25752 - 81110060 / 60plusABC16261
Harvest35U35_70688213e-25752 - 81110060 / 60plus



Contig Sequence (821 bp)

>U35_7068 821 Hv_44K_v2
TTTTGCTACTCCTGCCGTTCCTCTCTAATTTGAAAGGCATTCCATTGACTGAGCTCCCTG
CATATGTAAAGAGTGGTGCTGCATGCTTTCTGAATGCTGGTGGTAATCTGAACGATTGTC
CTGGAGCCCCTTTGCTACCACTGCTCTTCATAACTATGAACCTGGCCTTCAACATTTCTG
TTCTAAATCTGGTGAAGATGTCTACAGCACTGGTTGCTTCGCTAACAGCAACACTAGCAG
TACCTCTTTCGATATACGTCCTGTCACTTCCTCTTCCATACATGCCTGGAGGAACAAGTT
TAAGCACATCCTTTTTGGTCGGCGCTGCTGTCTTGGTGCTTGGGTTGCTCCTATACAATC
TCCCCCAGAATTCAGCTGATCAAATGAAGACAGAGTGATATAAACCAAAGTCACTCACAA
GGATGGCAGCAAGCTTTTGATGCACATTGATACAATACAAGACCGTGCATTTTCAACTGC
GATCAGCAGCACATGTTTGTACAGAACTTCTGAAGGGTGTGACGCTCTGCAACCTGAGAG
AAATCTTTTCGCACAGGCAGGGTTGTCAGGCCTGAAGCTGCAGCTGACAAATATTCAGTT
AACTGTACTGGTTCAGACAAGTGATCTCAACGGCTGGTATCACTCCTCACGTTTACTGCT
TGTCGTTAGCCATTAGACATCAACTGTTACGATCTGTCACAGGCTGCTGTCGCGTTTCAC
CCTCTTGCTGGCTACCTGTCCACCTACATAGTAGGGGTGTGGCTGAGCTGGGTATGCATT
TATCCATAACCCCCTGTTTGGATGTAAAAAAAAAAAAAAAA



Homology of Contig U35_7068 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None