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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41322_PI390587928Hv_44K_v2TGGTGAGCTTTTCTTGAGATCTGAGCGAGTTTTCTCTCCCATTTCCTGCTCTTCAGATCT99GeneList: turquoise
MasterList: Transcription_factors_Function_Probe_Module



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0841.1831.2600.9260.3940.343
Raw 65.445109.788103.708119.82118.81517.078



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35477620362e-24477 - 53610060 / 60plus None
MLOCAK36935825702e-24285 - 34410060 / 60plus None
MLOCMLOC_77258.215942e-24370 - 42910060 / 60plus None
MLOCMLOC_77258.117342e-24394 - 45310060 / 60plus None
MLOCMLOC_81360.1014719e-221077 - 11349857 / 58plus ABC39895
MLOCMLOC_81360.315559e-221097 - 11549857 / 58plus ABC39895
MLOCMLOC_81360.814659e-221008 - 10659857 / 58plus ABC39895
MLOCMLOC_81360.617589e-221081 - 11389857 / 58plus None
JLOC1JLOC1_51522.220258e-25365 - 42410060 / 60plus
JLOC1JLOC1_51522.120228e-25365 - 42410060 / 60plus
JLOC1JLOC1_54124.514895e-22950 - 10079857 / 58plus
Harvest21ABC247995413e-25100 - 15910060 / 60plus
Harvest35U35_121015423e-25100 - 15910060 / 60plus



Contig Sequence (542 bp)

>U35_12101 542 Hv_44K_v2
CAGCCGTGATCCGGCCCGGGACCGCTTTCTTGGCCGGCCATCGGCCTGTTGCTATCGTGA
CGGCCGATGCGTGGCCGCGCGAGTGACGCGGAGTGGCCATGGTGAGCTTTTCTTGAGATC
TGAGCGAGTTTTCTCTCCCATTTCCTGCTCTTCAGATCTGCCGCGGCGGGAGCTGCCGAG
TAACCGACGTGCCGGTGAGCTTCTCGAAATGGAGGAAGTGGAGGAGGCCAACAGGATGGC
CGTGGAGAGCTGCCACAGAGTGCTCGGCTTGCTCACCCAGACCCAGGGCCCGGAGCAGCT
CCGGAGCATAGCTCTCGGGACGGACGAAGCCTGTGCCAAGTTCAGGAAGGTGGTCTCCCT
CCTCGGCAACGAGCCCTCCGGAGGAACCACCCATCCTAGAGCCAAGGTTGTCAGCAGGAG
GCAGACCCCCGGGTTCCTCAGCCAGAAGGGCTTCTTGGACAACAACACCCCGGTGGTGGT
GTTGAACAGCGCACACCCTTCCACCAGCTCCGCGCAGGTGTATCCTAGAAACAGCATTTT
GG



Homology of Contig U35_12101 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None