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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41182_PI390587928Hv_44K_v2GTGAGCGTCCGTTGGTTGTCTTGCTTAGCATATTGAATCAAAGGTTTTCGCTCCTCCAAA996GeneList: red
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3491.7241.5200.7470.2390.244
Raw 422.789851.005648.463506.35155.74362.745



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_64189.330537e-232923 - 297910057 / 57plus ABC18481
Harvest35U35_2016810703e-25997 - 105610060 / 60plus



Contig Sequence (1070 bp)

>U35_20168 1070 Hv_44K_v2
ACCTGAGGAAGCTCATCGGGGCTCACTTTGAAGAAGCCGGCAGCAAGCAGCCACACCACC
ACTTCACCTTCCTCCTCCTCGGGGTACGTCATTCAGCTCTGCCAATGCCAATTGTTCTTC
TCTTGTTCCTATTGCTCATGGCGATGGTACCTGTCAATCGCCATATCACCTTGGTAATTC
CAACCCGTTAATGATATGAGGCGTGTTGATGCCAGTGAAAAACGTCCACTCATCCATCCT
GACGGTGGGAAACTCTTTGTTGGTGTGGATGTATGTATGTATGCAGGATCCTTCTGGTGC
GCCGGTGTCGAGGGAGAAGGAGCCGACGGTGCAGATCAGCAGACTGCCCAACTGGAACAA
CCAGACCAACAGCTACCTCGCCTGCCTGCGCGTCGCCAGGAAGCCCGCGACGACGGAGCA
GCAGCAGCAGCAGCTCCACCAGACGCCCTTCAGCCCGCTGGAGAGCAAGCTCAACTCCTT
GGCCCTGAACGAGGTGCAGCAGCAGCAGCACCATGCCGCCGCGGGCGCGCTCTCGCCCAA
GGTCGTCGGCCAGATGAGCCCCAGCTACATCCGGGAGCTCAGAGCTTGACTTGAGCCCCT
CATCGTTATCAGATTACCGTGTTGGTTGGTTGCCGTCGGTCACATGTGGTGACGAACTGA
CGACGAGCGAGCTATCTCGTATCCAGAAATGTATTCTCTGCTCTGTAAAATTACTACTAG
CTTGAAGCCTTGAACTCCATCAGCACAATGCTTGTCGTCCGTCGGCTAGTCTGGCTTTTG
CTACTCGTGATGTAACCCATGTTGCAGTCATTACACGAGTGGCTGTGCATCCCAGTCAGT
ATGATTATGATAGATCGTCTAGTTGGAGGGGAATGCACTTGATTTGAATTCCATGCTACA
TTCGTCGTGTCTGATGTGATCAGGGCATTTCACACACTCCAACAATTTACATTTTGTAAC
ATCTCTGGTTTCGGGACAGTACGAGGGTTGAGGGCAGTGAGCGTCCGTTGGTTGTCTTGC
TTAGCATATTGAATCAAAGGTTTTCGCTCCTCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_20168 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None