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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41166_PI390587928Hv_44K_v2ATTCCCTCTTTGTTTCACTTTGTTGCTGGAACAAATAGAAATGAAATCACTGGCTAGTTT21GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2140.9561.1281.0640.4060.494
Raw 368.265446.994472.754723.03594.117124.190



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC416316473e-2522 - 8110060 / 60minusABC41631
Harvest35U35_441296473e-2522 - 8110060 / 60minus



Contig Sequence (647 bp)

>U35_44129 647 Hv_44K_v2
TTTTTTTTTTTTTTTTGAATAAAACTAGCCAGTGATTTCATTTCTATTTGTTCCAGCAAC
AAAGTGAAACAAAGAGGGAATTCAAACAAGCCACGACACGACAATAGGTACATTTGACAA
ACTTAATTAACATAAAAATGAAGCAACATAGGGCAGCCCAAGCACGTGAACTACACTACA
TGTGACTAGAGCTACCATTTCTACCAGCAACAACTGCTTCTTAAAAGTCTTTCTACCATT
TCTACCAACAACAGCAACCATCCATCATCAATCAATTACACTACTATTCCAAAGACTTCG
GACCCCCTCCCTGATGTTGCTCTTCTAATCCGTGTACGCGAAGTGTACTCGACCTTGAGC
TTCTCAGCATTGGTAAAGTAGGAAGCCTTCTCCTCCTCTATTAAAGGCTCACTTTCCACC
AACTGATAGACATTAGCTGCTTCCAAAGCAACAAGCTCCTTCTTCAATCTCTCGGAGAAA
GCATCAGCTTCACCAATGCCCATAACATACATGTCAAGAAGTGTCTCCATGTCCTCCTCA
TCCTTTGCTTGAGACACGAGATCATTTTCCACAGTAACTTTTGCCGTTACTTTCCTCTCA
GTCTGAGTAGCAACAGATGTTTCTTGCCCTTCTTTGTTATTCTCTTG



Homology of Contig U35_44129 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None