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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41150_PI390587928Hv_44K_v2ACTAGTGAAGAGCAAGACCTCTGAGGATAAAACTGCTGGAGGGATATTGCTTCCAACACA395GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2390.3190.9492.0281.2952.110
Raw 224.727437.7751232.9504206.500945.2731657.606



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_54452.111332e-23415 - 47210058 / 58plus ABC00401 ABC28913
MLOCMLOC_54452.210742e-23356 - 41310058 / 58plus ABC00401 ABC28913
MLOCMLOC_54452.341202e-23580 - 63710058 / 58minus ABC00401
JLOC1JLOC1_35047.115011e-23469 - 52610058 / 58plus
Harvest21ABC0040110874e-24352 - 40910058 / 58plusABC00401
Harvest35U35_321594933e-25396 - 45510060 / 60plus
Harvest35U35_179910764e-24341 - 39810058 / 58plus



Contig Sequence (493 bp)

>U35_32159 493 Hv_44K_v2
AGCCCCCGTCTCCTCGGTTTCTCCTCCCCCCCGAACCCTCGCTCCATCCACCACTCTCTC
CTTCTCCCACTCCGGCGCGCGCTCAGCTGAATCCTGCCGCAGGTACGTGCCGCGGAAGCT
CGGTTCGTTGGGCCTCTCGTTGCTCACTCACGGTGTGATTTTGTGTGCTGTTGGCGGTTG
GTTTGGGCAGGAGCCATGGCGTCGGTGCATCTGTGCGGCCCCAAGGTGGCGTCGGCGGCG
ATGGCGAAGCCAGCGCTGGCGGACGGGCTCCGCGTCCCCGCTTCGTCGTCTGCGCGTCCC
GTGCCGACCGGGCGGAGGCTCCGAGGCCTCGTCGTCAGGGCCGCCACCGTCGTCTCGCCC
AAGTATACTTCTGTGAAACCATTGGGAGATAGGGTACTAGTGAAGAGCAAGACCTCTGAG
GATAAAACTGCTGGAGGGATATTGCTTCCAACACAGCTCAGTCAGACCACAGCAGGGGAG
GTTGTTGCAGTTG



Homology of Contig U35_32159 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None