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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_40707_PI390587928Hv_44K_v2TGATCAGGAAACTGATTTCGACATCTATGATCATCTTGGGAGGGAATAATTTGAATCAAA751GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_51570.831693e-221000 - 10589859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.427123e-22898 - 9569859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.227393e-22936 - 9949859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.925973e-22789 - 8479859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.128513e-221002 - 10609859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.629383e-221120 - 11789859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.729373e-221119 - 11779859 / 60plus ABC19830 ABC20810
MLOCMLOC_51570.326653e-22902 - 9609859 / 60plus ABC19830 ABC20810
JLOC1JLOC1_32955.525011e-22693 - 7519859 / 60plus
JLOC1JLOC1_32955.423671e-22856 - 9149859 / 60plus
JLOC1JLOC1_32955.326641e-22856 - 9149859 / 60plus
JLOC1JLOC1_32955.225901e-22782 - 8409859 / 60plus
JLOC1JLOC1_32955.127111e-22903 - 9619859 / 60plus
Harvest21ABC198308143e-25752 - 81110060 / 60plusABC19830
Harvest35U35_243938143e-25752 - 81110060 / 60plus



Contig Sequence (814 bp)

>U35_24393 814 Hv_44K_v2
CTCCGTCTTCCTCCCCCCGTCTTCTCCATCTCCTCGGATCGAATCGCGTGCGGCGTAAGC
GAAATTGGCATAGGCGAATCACCAGCTGCAGGAGCGGGAGCGTGCCGTGAGGCTGAGGCT
CTGCTGCCGTGCCAGCAAAGGTAAAGGTAGGCGCCCGCGCCACGCCATGGGCGTCCCTCG
CGCCTGACCATGCATTCCAGGCTGCTCAAGAGGCTCGCCAAGAGGATCATGTGAGCCGCC
GCGCGCCTGTGGAAATGTGGGAGATGGCCGCGCTGCTCTACTGCGCCGTCTTCGCGCTGG
CGCTTCATTGCGTCGGCCGTGGCTGCTCAGCGATCAACCTTGAAGGCTCAGCGCTGCTCA
AGTTCCAGTCGAGGGTGGAGGAGGATCCGCATGGCGCCATGGCAGGCTGGAGCGTGCTGG
ACGCCGACCCCTGCGGTTGGAACGGAGTCCGCTGCGCCGATGACAGGGTTGTGATGCTGA
ACCTAAAAGATCTCTCATTAAGAGGTAACCTGGGTCCAGAACTAGGAAGTCTTAGTCATC
TGCAGGCTCTTGTATTATCCAACAACTTGTTTAGTGGACTGATACCTAAGGAAATTGGTG
GTCTTGCAACGTTGGAGATATTGGACCTAAGCAATAACAACTTGACTGGGGAAGTTCCAC
AGAAGATAGCAGAAATGGCATCACTTAAGAATTTATTGCTTTCGAACAACAGATTTCAAT
GGCCCGTGGTCCAAAATTCCCATGGTAACTTTGATCAGGAAACTGATTTCGACATCTATG
ATCATCTTGGGAGGGAATAATTTGAATCAAAGAG



Homology of Contig U35_24393 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g48390.26482e-88protein|expressed protein
Brachypodium v1_2Bradi2g46370.16578e-100
Arabidopsis v10None