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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4068_PI390587928Hv_44K_v2AGTGGCCTAGCCTTCTACATTGGGTTACACATAACATGGAATTGCACGATCAAATTTTTG374GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36878438373e-21541 - 6009758 / 60plus ABC07608
MLOCMLOC_11443.321163e-21482 - 5419758 / 60plus ABC07608
MLOCMLOC_11443.221383e-21431 - 4909758 / 60plus ABC07608
MLOCMLOC_11443.120823e-21433 - 4929758 / 60plus ABC07608
JLOC1JLOC1_7578.120952e-21431 - 4909758 / 60plus
Harvest21ABC278564373e-25375 - 43410060 / 60plus
Harvest35U35_287924373e-25375 - 43410060 / 60plus



Contig Sequence (437 bp)

>U35_28792 437 Hv_44K_v2
AGGAATTCGGACGAGGGTCCACCTGACCCTCGTGCTGCGCGCGGCGCTCAGCCACGCCCC
CGAGGAGCGCAAGGCCGCTGAGGCCAGCCTCGAGCAGCTTCAGTATACGCAACAACATTT
GGTGAGATTGTTACAGATCATTGTCGATGGAAATTGTGATATGGCTGTGAGACAGGTCGC
AAGCATTCACTTCAAGAACTTTGTTTCCAAAGCCTGGTCTCCTATTGATCCTGAAGAAAC
ACGTAAAATTCCAGAAGTTGACAAGTCTATGGTTCGCGAGAATATACTGGGCTTTGTTAC
TCAATTGCCTCCACTGCTAAGAGCACAGCTTGGAGAAAGTATCAAGACCTTAATCCTTGT
GGATTACCCTGAGCAGTGGCCTAGCCTTCTACATTGGGTTACACATAACATGGAATTGCA
CGATCAAATTTTTGGAG



Homology of Contig U35_28792 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g26841.17352e-69protein|importin-8, putative, expressed
Brachypodium v1_2Bradi5g05650.28942e-82
Arabidopsis v10None