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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_40550_PI390587928Hv_44K_v2GAATATTAGGCGGGGAGTGTATGATGCTTTCAACGTTCTCATTGCACTTCGTGTTATTGC195GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.3172.2611.1060.9260.5570.581
Raw 295.870434.595193.343247.05053.05760.858



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_46170.37173e-21471 - 5309758 / 60plus None
MLOCMLOC_46170.23793e-21139 - 1989758 / 60plus None
MLOCMLOC_46170.47123e-21442 - 5019758 / 60plus None
MLOCMLOC_46170.14173e-21145 - 2049758 / 60plus None
JLOC1JLOC1_29917.35212e-21253 - 3129758 / 60plus
JLOC1JLOC1_29917.23192e-2166 - 1259758 / 60plus
JLOC1JLOC1_29917.14102e-21142 - 2019758 / 60plus
Harvest35U35_173425853e-25196 - 25510060 / 60plus



Contig Sequence (585 bp)

>U35_17342 585 Hv_44K_v2
GCAAATTCAGCAACCTTAAGGGTTGCGCGCCCATTTGCCTGGGGTACGAGGATTTCTACA
GGTGCCGCCTCTACCTGCGCATCCAGTTTGTGAGAAAGTTGAAGCCAAAGGAAGAACAAC
ATACAATGAGGTTGCGGATGAAATTTATTCAGAGCTGAAATCCATGGCACATATTGGTCA
AGGGTTTGATGAGAAGAATATTAGGCGGGGAGTGTATGATGCTTTCAACGTTCTCATTGC
ACTTCGTGTTATTGCAGCGGCCGCTCACGGGAGCCGACAGCGATGCACGGTGAAACACCA
GCGTCATCACAGGGTTTTCAACGTGTGATCTGTAGAGATTGTGACGGGGACTGATATTAC
CAGAATTCGGGTGAAAAATTGTGTGGTGATATGAGAAGGCACAAAAGAATACATAGCAGA
CCGCAGACAAGAGATTAGGCCGGTTGATGTCCTGATGGAGAATTTTGTGATGGCAGGTCC
TCTCTTTCTATTCTGGTTTCTTCCTTTTTCTTTCTGTTCTCACTGTTCAAAAGAATACAA
GTCGCTTGGCGCGACGACGATAGGGTTGTGACCAGCGGCCGCTCG



Homology of Contig U35_17342 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None