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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4051_PI390587928Hv_44K_v2GAGCTCGACGGCGCGCGCGCGCAGCATGCCGCTTCGTGCCAGCATGGCTCCGCGCCTGCT55GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_54501.128182e-24480 - 53910060 / 60plus ABC17711 ABC21718 ABC25907
JLOC1JLOC1_35083.123928e-2568 - 12710060 / 60plus
Harvest21ABC253454263e-2556 - 11510060 / 60plus
Harvest35U35_253544263e-2556 - 11510060 / 60plus



Contig Sequence (426 bp)

>U35_25354 426 Hv_44K_v2
TTCCGTGACCCAGCAGTGGCAGCGTGGCACCGACCGACGCCGAGCTAGCTAGCCCGAGCT
CGACGGCGCGCGCGCGCAGCATGCCGCTTCGTGCCAGCATGGCTCCGCGCCTGCTCGCGG
CTCTCGCCGGCGCCGTCGCCGCCGTCGCGCTCCTGCTGCTGCCGGGCGCCGCCGAGGCAC
GCGTGCTCCTCTCGCTCGACGACTTCGGCGCCGTCGGGGACGGCATTGCCAACGACACCC
AGGCATTGGTCGACGCGTGGAAGGCGGCGTGCGCCGCCGGCGACAACACCTACCTCAACG
TGCCAGCCGGCAAGTCCTACCAGATCTGGCCCGTCACGCTCGCCGGCCCCTGCCGCGGCG
AGATCAAGCTCATGATTTCGGNGAACATCGTCGCGCCGGAGAGCCCGGAGGAGTGGGCGG
ACGGCG



Homology of Contig U35_25354 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None