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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_40111_PI390587928Hv_44K_v2GTTGAACTGCTGTCACTGTGGCAGCAACCAATAAAATGAGTTTCTGTCTCGGTCAAAAAA561GeneList: paleturquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 30.1508.1222.8280.6330.1880.127
Raw 1409.395650.838193.20470.3656.0564.188



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC047316616e-22522 - 5819758 / 60plusABC04731
Harvest35U35_136897023e-25562 - 62110060 / 60plus



Contig Sequence (702 bp)

>U35_13689 702 Hv_44K_v2
AGTCAGCCTGGGAGGTACCCGTAATCATGTTCTTGATGAAGCCCTTCCCTCCTTCTCCCA
TTGATCCTGAAGAAGCATCGTTCGTTTGGTCCAGGAGAAAGAGAGATGGAGGTGAAGAAG
AGAGCGGCAGCCATTGCCGGCCTGTGCATCATGCTCCTCCTGGTGCTGCCGTCGGGGCAG
CGGCAGCAGGTGGCCGCCATGTCCGAGTTCTGCAAGTGCTTCGACGACTGCTACCCCGGG
TGCAGGAGCCCCGGCGTGCCGCGCTGGCTCTGCGTCCCGTTCTGCGCCAACAAGTGCAGC
CCCAGCAGCAACCAGGCCGGCGACGGTGTCGGCTCTGCCGCCGCGACGTGCAGGATGGCC
TGCAAGATACACATCTGCGACTCGTCAGAGGAGCCAGCCGATGCAGATGCAGCTGACGCC
GACGTCTGCGTGCAGAACTGCAACAAGATGAAGATATGGAGCCACGAGGCCCATAATTAG
CTTCCAATGCAAGCTGCTCTAGAGGAGAAAAAGATTTGAAGAGCTAGCTTGTTGTCGATC
ATGGGATCGTATATATACGATGTTGAACTGCTGTCACTGTGGCAGCAACCAATAAAATGA
GTTTCTGTCTCGGTCAAAAAAAAAATGTCATCTGCTATACTATTATACGTAGAGAAAAAT
CAATAATAATTAATGTTAATCGTTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_13689 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None