barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_40033_PI390587928Hv_44K_v2CTCTGCTTGATGTGGTTATGTGATAAGTATATATGGATGGAGTGATTAGGTTTCCCCAAA14GeneList: saddlebrown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0630.2461.0301.6801.1431.872
Raw 23.015136.152509.0561242.234305.784554.670



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_222339063e-2515 - 7410060 / 60minus



Contig Sequence (906 bp)

>U35_22233 906 Hv_44K_v2
TTTTTTTTTTTTTTTTTGGGGAAACCTAATCACTCCATCCATATATACTTATCACATAAC
CACATCAAGCAGAGTACTTGCCGTCCGGGTTTTTTCCGATCTCAATGCATTTCATCGCTC
ATAGATCACCTCCCTCACCAGATTAACTAGTCTTCGGGCAAAAGCTAATCGCCACCGAGA
CGGAGGGGACAGACGTGATATGAATATATAATAAGATAACAAAAGAATAAAAAAAGTGTC
GTCAGTTTACTGGATCCTGGTCCGCTTCAGGTGGGGCCAGCTGTCTGGCCGTCTTATCCG
TTAGGTACGGCCACGAGACACGTACGCTCCCCGTCGCGTGTGGGCCCCGCTCCGACGAGC
TGTCGCTAATGGCTGTGCTTAACTCCATTCTTTAAACAGCTCTCTTTTCTTTTCTTGTTG
CTTTTGCACACGTAAGTTACGTGCTACTAGGAGTAGTACTATGTGCATCCGATTGCTTGA
TGTTGGTGGTAGCATATCAGTACGCGAAGCTGACGCCGCCGCCGGTGGCACGGCGTCCTG
ACCGCACGGCCGCGGTGGAGGCGCCCTTGGCGCAGTGGCTGCTGCCGGCGTCCTCGTCGA
TGAATATCTGCCTGCACCGGCACTCGACGCTGCAGAACGCCTTGTCACCTCTGTACATGT
AGATGTCATTGTTCTCGGCTAGATCCTTGTGGCACAGCAAGCAGCGCTGCAAGAAGGAAC
CCGTGCTTGCGGCGGGCCTCGCTGCCGGCGACCAAGGGGATGAGGAGGAGATCTTGGGGC
TATGGAGGGTGGCCTTGCTGATGATCTTGGGCGTGGTGGAGTTGCCCTCGTGGGTCTCTA
GGAGCACGCTCAGGCCAGCCATGAAGTGTATGCCTTTCTTCTCGCTAGTTAATCAATTTC
AGCTCT



Homology of Contig U35_22233 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None