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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39850_PI390587928Hv_44K_v2TCTTCAGGCCATACAGTGAAACAGAAAAGTTCAAAGGTGCAGCTGAAGGTCTCCTCACAA527GeneList: turquoise
MasterList: Transcription_factors_Function_Probe_Module



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2651.0471.3300.9400.6020.535
Raw 388.898478.798558.706554.558137.987134.707



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_17175.519282e-2453 - 11210060 / 60minus None
MLOCMLOC_17175.132192e-241454 - 151310060 / 60minus None
MLOCMLOC_17175.232312e-241480 - 153910060 / 60minus None
MLOCMLOC_17175.331152e-241363 - 142210060 / 60minus None
MLOCMLOC_17175.430902e-241331 - 139010060 / 60minus None
JLOC1JLOC1_11857.231038e-251694 - 175310060 / 60plus
JLOC1JLOC1_11857.130888e-251694 - 175310060 / 60plus
Harvest21ABC242225953e-25528 - 58710060 / 60plus
Harvest35U35_129015973e-25528 - 58710060 / 60plus



Contig Sequence (597 bp)

>U35_12901 597 Hv_44K_v2
GAACAATAAGGTGCTCNAGGGAAACCAGCAATAGCAAGATTCCACCGGAGAAGTCGAATG
TTGATGGGGATACCAGTGATGGCAATACTCTGCCAAAGAATGTTAAGGTGGAGGCCGGGG
GTGGCAAGATTCCGACGAAGACTGGTGTTTTAAAGCTTCTTCTGAAGAACAATAAGATGG
TCAGCGAAAACACTGATGAAAACTTTCTTCCCAAGAACATTAAGTTGGATGGGGAGACCA
GTGATGGTAAGAATTTGATGAAGACCAGTAAGATGGACACAGGAAGTGGCGATGAGAAGG
TGGCGGCTAAGAACTGTATGGTGGATTTAAAAGCTGTTGCTGGCAAGATTCCATCGAGGA
ACAGTAGGGTGGATGAAGAGACCTTTACTGGCTATAAACAGGATAAGGATAAAAGCAGTG
TTCTCATTGAGTCCCAAATGCGGGATTTAAATGGTAGGAAGAAAGTTACAGGAAAACTGG
TCTCCTCTGTCATATTGAGGAGAAGCGATCCAAGCGTAGTGGGAGTTTCTTCAGGCCATA
CAGTGAAACAGAAAAGTTCAAAGGTGCAGCTGAAGGTCTCCTCACAAGGCAATCATC



Homology of Contig U35_12901 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g55990.115372e-54
Arabidopsis v10None