- Probe CUST_39754_PI390587928
- Source Contig U35_36919
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_39754_PI390587928 | Hv_44K_v2 | GTTGATATGGAGAAAGCAGATGTTGCTCAAGAAAGACAAGTAGTTGAGCAATTATTGATG | 148 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_55872.7 | 3488 | 2e-24 | 2216 - 2275 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.6 | 3518 | 2e-24 | 2246 - 2305 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.10 | 3174 | 2e-24 | 2124 - 2183 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.3 | 2989 | 2e-24 | 1939 - 1998 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.8 | 3354 | 2e-24 | 2322 - 2381 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.5 | 3271 | 2e-24 | 2122 - 2181 | 100 | 60 / 60 | plus | ABC17276 |
| MLOC | MLOC_55872.1 | 3361 | 2e-24 | 2439 - 2498 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.2 | 3236 | 2e-24 | 2314 - 2373 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.11 | 3094 | 2e-24 | 1836 - 1895 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.9 | 2785 | 2e-24 | 1910 - 1969 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.12 | 3041 | 2e-24 | 1900 - 1959 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.13 | 3137 | 2e-24 | 1996 - 2055 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| MLOC | MLOC_55872.4 | 3144 | 2e-24 | 2049 - 2108 | 100 | 60 / 60 | plus | ABC17093 ABC17276 |
| JLOC1 | JLOC1_36080.8 | 3229 | 8e-25 | 1893 - 1952 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.7 | 3470 | 8e-25 | 2129 - 2188 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.6 | 3299 | 8e-25 | 1958 - 2017 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.5 | 3091 | 8e-25 | 1750 - 1809 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.4 | 3246 | 8e-25 | 1910 - 1969 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.3 | 3498 | 8e-25 | 2069 - 2128 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.2 | 3347 | 8e-25 | 2006 - 2065 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_36080.1 | 3175 | 8e-25 | 1834 - 1893 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC32400 | 255 | 3e-25 | 149 - 208 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_36919 | 255 | 3e-25 | 149 - 208 | 100 | 60 / 60 | plus |
Contig Sequence (255 bp)
>U35_36919 255 Hv_44K_v2 GATTAATGCTTGTGTTAGCATTCTATTTGGATCAAGTCTCTTAATAGGTGGCAGTGTCGG AAACCCCTTACTCCTCTTTAGGTGTTTGCAGAAGAAACATGCACCACCATTACAAAGTAG CTCTGTGCAGCAAAATCATAAAGTAGCCGTTGATATGGAGAAAGCAGATGTTGCTCAAGA AAGACAAGTAGTTGAGCAATTATTGATGNGATNNTGCAATGGNCAANACCAAGCTATCAT TTGTGACAATCTGAG
Homology of Contig U35_36919 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |