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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39561_PI390587928Hv_44K_v2GCTCCAAGTTGTGAGCAGTTTTGTATTTCAGAGAGATGTTTATCCTAAAGTGAAAGTTTT859GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.1250.1430.6381.9821.3251.962
Raw 3.0247.02936.056170.84740.11564.956



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC106809403e-25860 - 91910060 / 60plusABC10680
Harvest35U35_191569403e-25860 - 91910060 / 60plus



Contig Sequence (940 bp)

>U35_19156 940 Hv_44K_v2
GCCTTGTTTCAGCCTCTGCTATGGTTCGTGAGGCTCCGGGTCCTTCTTTGGTCATGTTGT
CGATGGGCGATCGTCTACGGAAGCTTCCTCAGTCTTTGTTGGGTCTACTTCTGATGAGTA
TTTTCTTCTCAATTTGCTGTCTTTTTTTATTGTATAATTTTGCTATTTACGCTATTTGTG
TTCTTTTTCTTAGTTTTGGCCTCTAGCGAGGCCCGTCGGCGTGGTTGGAAATTTAGCACA
CGCTATTTGTGTTTTTGTGCTTAGTTTTGTCTTCTGGTGAGGCCCGACGATGGTTGGAAA
TTCGGCGTGAGAATCATCATCTGTTTTGGATTGCAACCTACGACCTGCAGTCACCGGCCC
TGGGGCTACGAAGCAAGCCGTGCATGCCCTAATCTTCATAAGTATGTTATCTCCCGTAGA
TGCAAGGTTCGTCCCCAATCATAAAATTTGGAGTCTCGCACTGAAGAACCAAGGAGGTGG
AAGTATGAACAATGCCCTCATCAAAGCAACTCAGTTTGGATTTGAATCTAAGGATGACTA
TTGAGAAAAACGTACCCAACCTCCTTCATATGAGGCACTTGGCAGGGAGACGATGGGCTA
TACTTCCACATAGCCTGTGACCATGATGAGTATATGGTATTTTGGCTAGCTTTCTTTGTT
GTGTTAAAAATTGAGTCGGGTAGGATGTGAAGTCTTCACAGAAATGGAAACATTTTTGTA
CGACCACGGACTCTTGAAAGGAACAAAAACAGGTGCCCGAAATGATACTCCCTCCGTTCC
TAAATATATCTCTTTTTAGAGATTTCAATGCGGACTACATAAGGAGCAAAACAAGGAGTA
GATCGGGAGTAACATGCATGCTCCAAGTTGTGAGCAGTTTTGTATTTCAGAGAGATGTTT
ATCCTAAAGTGAAAGTTTTTCTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_19156 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None