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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39552_PI390587928Hv_44K_v2TGATCGGTTGTGTATAGAGTTGCTAAAAAATAAAATAAAAGGGCCCCTGTCGTTCAGTTG706GeneList: plum1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0220.1460.7061.5101.4581.746
Raw 319.3353868.65716046.76749320.90018129.00023693.633



Probe Sequence's BLAST hits in Barley Unigene Datasets

This probe has no hits to the blast databases


DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence



Contig Sequence (787 bp)

>U35_8881 787 Hv_44K_v2
GCTCAACAGTAACGCACGCACCATCTCTTGCTCTCGGTCTTGCACGCGATCGATGCCTCT
CTCGGCGGCTTCCATCCTCCGCGCCTCCTCCCTCGCCCTGCTGCTGCTGGCGGCCACGGC
GACGGGCGGCGACGGCAGCACGACGAGCGACTCGTCCGTGGCGCAGTCCATCGACGACAC
GGAGATGTACCTCTGCTACCTCTGCACTGGGCGCAACCCGATGCTGATCAGGTACTGCCC
CATCTACTGGGACTGGTGCCACCTCGTGTGCTACGCCCCCGACGTCGCCGCCGGGCCCGC
TGCGTCCCTGCGGCCGGCAGCGGAAGCCACGGCCCCCCGCGAGACATACGCCCAGCTGGG
GTGCTACGTCATGAAGCTGTACCGGAACGGCACCTACGTCATCGTCAGCCGCCACGACTG
CTCCAAAATGGCCAGTTGCATCCTCTCCTGCGGCGGCGGCGACGTCGCCGACCGGAAAAC
CTTGGGCGCGGCGCCGCTGCCGGTTACAGCGACGGCGCCCCAGGGAATGCTGCCGTCGTC
GCGCGTCGCCGAGTTCCAGCGGTGCGGCGATCAGGCCATGGGCCTGCCTTTGAGCGCCGT
CCCCGGCCGCGTGTAGCAGCTAGCGGCGCCGGTCAACTTTGGGAGGATGAGCGCGTATCG
GCATGCAAACATGCGTGCGCGCTTGCAAGGCAGTTGACAAGAGATATGATCGGTTGTGTA
TAGAGTTGCTAAAAAATAAAATAAAAGGGCCCCTGTCGTTCAGTTGNCTTAAAAAAAAAA
AAAAAAA



Homology of Contig U35_8881 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None