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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39523_PI390587928Hv_44K_v2GTGGTTGCTGTTTGGGTAATCGTGTCGATGTAGTAATGCCCTGTTCTGCTTTGGAAAAAA535GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.1051.6711.0180.8790.4130.416
Raw 5374.6706724.9073602.6434893.823796.413881.228



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC172596313e-25536 - 59510060 / 60plusABC17259
Harvest35U35_139116313e-25536 - 59510060 / 60plus



Contig Sequence (631 bp)

>U35_13911 631 Hv_44K_v2
CCCGCCTTCTCCGCACCTCCAATCCTGAAATCTACCCGCCATGGACGCATCAACCGCCGG
CGCCGTCTCCAAGGCGAAGAAGTACGTGGTGGGGCGCAAGCTCGGCGGCGGCCCCAGGAA
GAAGGCGGTGGCGCGGTCCGTCAAGGCCGGGCTGCAGTTCCCTGTCAGCCGCATCGCCCG
CTTCCTCAAGAAGGGCCGCTACGCGCAGCGCGTCGGCATGGGCGCCCCCGTCTACCTCGC
CTCCGTCCTCGAGTACCTCGCCGCCGAGCTTCTTGAGCTGGCCGGGAACGCCGCCAAGGA
CAACAAGAAGTCCCGCATCATCCCGCGCCACCTGCTGCTTGCAGTCCGGAACGACGAGGA
GCTCGGCAAGCTTCTCGCCGGCGTCACCATCGCGCATGGCGGCGTGCTGCCCAACATCAA
CTCGGTGCTGCTCCCCAAGAAGACGGCTGAGAAGGAGCCCAAGTCGCCCAAGAAGGCCGC
CAAGTCCCCCAAGAAGGCATAGCCGATTACTGTCTAGTGCTTCCTAATAGAATAAGTGGT
TGCTGTTTGGGTAATCGTGTCGATGTAGTAATGCCCTGTTCTGCTTTGGAAAAAAAAATG
TTTGTTCATGATTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_13911 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g17100.11603e-52protein|Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
Brachypodium v1_2None
Arabidopsis v10None