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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39238_PI390587928Hv_44K_v2ATGTTGATATGGACAAATTGAATGTGATCATGTGGTGCGCATCTTATATTCAGTGCAGTG494GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_55658.344539e-22456 - 5179760 / 62plus ABC42998
MLOCMLOC_55658.521929e-22396 - 4579760 / 62plus None
MLOCMLOC_55658.434269e-22452 - 5139760 / 62plus ABC42998
MLOCMLOC_55658.141939e-221250 - 13119760 / 62plus ABC42998
MLOCMLOC_55658.238049e-221222 - 12839760 / 62plus ABC42998
JLOC1JLOC1_35933.331295e-22263 - 3249760 / 62plus
JLOC1JLOC1_35933.233295e-22463 - 5249760 / 62plus
JLOC1JLOC1_35933.133655e-22397 - 4589760 / 62plus
Harvest35U35_58525543e-25495 - 55410060 / 60plus



Contig Sequence (554 bp)

>U35_5852 554 Hv_44K_v2
AGCAGGCTAGGTCCGGTCCGGAATTCCTTTATTCCTGTTGGCCTATGGAATTTCCCCATT
CCACCCCAGGAGAGGGAGGAGCGAGAGGCGCCACAGCGAGCGAGAGAGGGGAGATGCGGG
AGGAGGTCAGGAGCTCGTCGGGGGCGGCGGCCGAGCCGCAGGTCGCCGTCGTCCGGTCGT
CGTCGCCGCCGCCCACCCCGGTGGCCAGTTCTGCTGGTGCCTCATCACCTGCTATGCAAA
TTAATATAGTAAGCATAGATTGGCTGGGTAACAGACAGGCTTCCAGGGTTGATTCCTCAT
CACACGTTGCACCACATGCCTATGGGCCTGCTCATAGCTTTGATGCTGCTGGAACTGCTT
TGGATTCTGCACCATCTTGTAGACCATGGGAGCGTGGAGACTTACTTCGTCGACTGGCAA
CATTCAAACCTTCAACTTGGGATGCTAAGCCGAAGGCTGCTAGTTCATTGGCTTGTTCTC
AAGAGGCTGGGTAAATGTTGATATGGACAAATTGAATGTGATCATGTGGTGCGCATCTTA
TATTCAGTGCAGTG



Homology of Contig U35_5852 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g06480.19584e-52
Arabidopsis v10None