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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39029_PI390587928Hv_44K_v2CTTAAACCGAATTCTATCTGTATCCCTTTTTTGTAAACCTAAGGCAAGGATTTTACCCAA646GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0760.1120.5372.0562.4693.288
Raw 3.22510.07850.952313.466123.852182.358



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC121307243e-25647 - 70610060 / 60plusABC12130
Harvest35U35_201137243e-25647 - 70610060 / 60plus



Contig Sequence (724 bp)

>U35_20113 724 Hv_44K_v2
CAAAAGCAAAGCAAAGCAAGCGGCAGAAAGCAAGCTGAAGGCACGCAGCACCTCAGCTAC
CCAACAACAATCGATGGCTTCATCCGGCTACCTCAGAGCGGCCACTCGCAGCCTCCAGGC
GCTCCTCCTCCGGCAACGCCCAGCTGCTCCGGCCACAAGTGCGACACCGCGCGCGCTCGT
CGCTTCCTCGGCGACACGGCGCGCATCGACGGTCGCCAACCCGCCGCTCGGGGCGGAGCC
TTTGCCAGAGGACGCGCCGCGGCAGGCACCGCCGAGGCTCGGGGAGGAGGACCCCGTGGG
ACCTCCCACGCCGACGCCCAAGGAGAAGATAACCGGCACACCGCCGACGGAGGAGGATGA
CGACGGTGGGCTACCCGGCGGAATGCCGGAAACGACCCCGCCGCCGGACGTGCCGCTGCC
CCCTGCCTCGCCCGATGGCAGCAACGTCTAGCTCGCATGGCCCGTCTGTGCGCGCTTGCT
GCGTAGCTCTTGCATACGGTGTTAGTGTGTACATACATGTTGTAATGGAGTACGTTCTAC
TTTTTCCCATACAGAGCACCGACATGTACACTGCTAGCTGTACGGTGCGCACATGGTGTT
AGTGTTTGCCTGTTCATTGTTAGACTTGAGATATCTCTATCTCTTCCTTAAACCGAATTC
TATCTGTATCCCTTTTTTGTAAACCTAAGGCAAGGATTTTACCCAATAAAAAAAAAAAAA
AAAA



Homology of Contig U35_20113 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None