barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38976_PI390587928Hv_44K_v2TTTTGTTAAGCCTGATTGATGACTCGTATGTTTAAGTGGGACGCCTTATTTGTATGGACA696GeneList: tan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0200.1322.6913.6120.9321.118
Raw 3.33849.667968.5621920.540187.913242.083



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_363057593e-25697 - 75610060 / 60plus



Contig Sequence (759 bp)

>U35_36305 759 Hv_44K_v2
GGCGAATTGGGCCCTTCGNAAGATGCTCGAGCGGCCGCTGATTGCTGTGGTGGATAAGAG
TAAGAGGATTCCATACTTAAACAGGCAGAATGAAACCAGTCAGCATGTGCTTGCTATTTG
TGATTTCGACATGAGATTTACATGTGTGATGTCGGGATGGCCTGGTTCAACACACGACAT
GAGAGTTTTGAAAGATGCCATAAGTACTCATCATCACAAATTTCCCCATCCACCATCAGG
GAAGTACTATGTGATTGATGCGGGATACCCAAACCGGTCAGGCTACCCTTCGCCATACAG
ATGCACAAGGTACCATGTGCAGCAATAGCAAAACGGCCCGCCGCCACAAGGTATGAAAGT
AACCTTCAACCATGCACACGCCAAAGTTAGGAATGTCATTGAGCGATCATTTGGAGTGTT
GAAGATGAAATTTAGGATTTTGTTGAACATGCCAAAATTTCCAGAAGACAAGCAAACTAG
AATTATTGTTGCTTGTGTGGCTCTTCATAATTTCATTCGAGAGAGAAGAATTGCGGATAG
AGAATTTGATGCCTGGGATGCGGATGAAAATTATAACCCAATGCCTAGTTCTTCGGCATC
CGCATGGCCAGAAGATGAACCTTTTGTTGAAGATATCAACATGAACGCCTTTCGTGATGA
GTTAGCTCATGCTCTCTTTCATGGAATGTAATTTTATTTTGTTAAGCCTGATTGATGACT
CGTATGTTTAAGTGGGACGCCTTATTTGTATGGACAGAA



Homology of Contig U35_36305 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g36530.15425e-94protein|transposon protein, putative, CACTA, En/Spm sub-class, expressed
Brachypodium v1_2None
Arabidopsis v10None