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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38956_PI390587928Hv_44K_v2GGAGACGATGCCAATATCGAAGATGATAATCGTATTGTAACAGAAGGAATTGTTTTTCTT468GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.1200.1000.5632.0181.6954.191
Raw 3.2613.42034.809204.82253.681146.698



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC528435843e-25469 - 52810060 / 60plus
Harvest35U35_506015843e-25469 - 52810060 / 60plus



Contig Sequence (584 bp)

>U35_50601 584 Hv_44K_v2
GCAGGAGCACCCTAGGAAGAAATTGCTACAACCTTTGCCGCGTCCGTGGTGCTCAGAAGT
TATGCGCAAACGCGTGTAGGTGTAAACTCACAAGTGGCCTAAAATGCCCTTCAAGCTTCC
CAAAATTGGCCCTTGTGTCAAACTCAGGTAAAGGGAATGAACTCCTTCTATTCCATATTA
CTAGTTCTTTCTAAAATAAGATGTCATCATATAAAGCGTATGGCGAGTTAGAGTTTTCTA
AGTTTTCCGAATAATATAATGAACTTTTTTTAAAAAAAATCCGATGATATTTGTATGATC
AGTTTTTCATGAATAATGTTTCATAGATATAAGTTTTCTTAACTTTTTACCAACAAGTAA
ATTTTTTTGAAAGGCGGTCTCTTAGGGTCCGGTTCATCAAAAAAGTTAGAGAAAAGTTGC
CTGGTTACCAACAAGTAATTGTGAAATGACTAATAAAAAGCGAATGATGGAGACGATGCC
AATATCGAAGATGATAATCGTATTGTAACAGAAGGAATTGTTTTTCTTAGATGCGATTAT
ATTTACATGCTAGATATTTTATTTTGACAGATGAACCAGACACC



Homology of Contig U35_50601 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None