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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38891_PI390587928Hv_44K_v2CCTCTTCAATTTTTTCCTGTTAAAAATAAAGACGGGTCATGGCCTGGATCTTTAATTACA965GeneList: green
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9641.5161.5831.1300.2960.357
Raw 68.252165.752153.943167.71815.58520.620



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_2435410493e-25966 - 102510060 / 60plus



Contig Sequence (1049 bp)

>U35_24354 1049 Hv_44K_v2
GAACAAAAGGAATTTATTTATGTACAAGGCATCTGCTGCACACTTATGGCTTCAACCTGC
TTGATGCATGCACTTCTTTATGCTGCGGTGCCGCAACTCCTTGTATCATGATGGACAAAG
ATTATGGTGGTGTTGTGTTGCCAAGAGGGGCGAGGAAACTGAAATCCCTGCACACTATAA
GGGGTGTGCACGTTGCATATGGAGATGCCGTCATACAGGAGATTGGAAGACTCAGCGGGC
TACGCAAGTTAGGAGTGATGGGCATCAATGAGAAAAATGATGTAAAGTTTTGTTCAGCCA
TTTCTAATCTTAGCCGCCTGGAGTCATTATCAGTGCAGTCAGACAAGGGATGCCTAGATG
GCATTGCCTTGCCTCCGAAGAACCTCCGGAGCCTCAAACTGGAGGGACGCCTGGGCGTAT
TGCCAGAGTGGATCAAGAAGCTTCAGAATCTTGAGAAGTTAAAGCTGAGCTTCACAACAT
CCAGCCAGGTTGAGCAGGATGCTGCTATGGAAGTCCTGGGACATCTGCCAAACCTATCCA
CTCTCCGACTGTCAGGGTGTTCATTCAAGGGCGGAGAGCTCCATTTCCAAAAGGATGCTT
TCAGAAGCATTGTGGTGTTGGATATCGAAGGCTTAGGGGGGATCAAATCGGTGAACTTTG
ACCGAGGAGCAATGCCTGAACTCGAGCAGCTCAAGGTAACTGATGCTTGTAAAAGAGGTG
GAATTGAGTTCTTTGGGCTGGATATCCTCCCGAGCATCAAGGAAGTCTTGCTTAGTGTTC
ATTTCAAGATGGACCGTGCTGGGACGGAGTTAGAGAGGGAAGCACGGCTCAAGGAGCAGT
TCCGGACTCAGCTTGCTAGAAATCCAAAGAAACCCGTTCAGAAGATGGAATGAACTTTTT
TTAAGCCTGGACTTTAAGTGAGTGACTTGTGATAATGCTATTGGAGAATATTTCTTGCTT
AGTTTCCTCTTCAATTTTTTCCTGTTAAAAATAAAGACGGGTCATGGCCTGGATCTTTAA
TTACATGTGTTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_24354 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g57305.14011e-61protein|disease resistance protein, putative, expressed
Brachypodium v1_2Bradi2g39547.18322e-54
Arabidopsis v10None