- Probe CUST_38871_PI390587928
- Source Contig U35_12382
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_38871_PI390587928 | Hv_44K_v2 | CTGTGTATTAGAATGTGTTTGTTGTCTTATAAATGGGAAATATATGTTTGGACCGAGGTC | 102 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK361188 | 1697 | 2e-24 | 1588 - 1647 | 100 | 60 / 60 | plus | ABC07022 ABC10800 ABC22482 |
| MLOC | MLOC_12228.1 | 1115 | 2e-24 | 21 - 80 | 100 | 60 / 60 | minus | ABC07022 ABC10800 ABC22482 |
| JLOC1 | JLOC1_8200.1 | 1118 | 8e-25 | 1021 - 1080 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC22482 | 180 | 3e-25 | 103 - 162 | 100 | 60 / 60 | plus | ABC22482 |
| Harvest35 | U35_12382 | 180 | 3e-25 | 103 - 162 | 100 | 60 / 60 | plus |
Contig Sequence (180 bp)
>U35_12382 180 Hv_44K_v2 CTTCTCTGCATCATTTGGATATAACTGAATAATTCTCATATAGATGGGGAGGTCCTCCTG GCAATGGCCATACTTGCAGTCGCCCCTATGTGTGTTGTTGGTCTGTGTATTAGAATGTGT TTGTTGTCTTATAAATGGGAAATATATGTTTGGACCGAGGTCTAAAAAAAAAAAAAAAAA
Homology of Contig U35_12382 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |