- Probe CUST_38644_PI390587928
- Source Contig U35_16011
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_38644_PI390587928 | Hv_44K_v2 | CCTCGTTAAGTTTTAGATAAGTTGTACGAATGTTGATGGATGCTTCGAGTTTAAGTTTTC | 468 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK249822.1 | 707 | 3e-22 | 547 - 605 | 98 | 58 / 59 | plus | ABC08233 ABC29276 ABC40874 |
| JLOC1 | JLOC1_20363.1 | 207 | 1e-22 | 106 - 164 | 98 | 58 / 59 | minus | |
| Harvest21 | ABC38379 | 498 | 3e-25 | 125 - 184 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC08233 | 625 | 3e-25 | 440 - 499 | 100 | 60 / 60 | plus | ABC08233 |
| Harvest21 | ABC08231 | 736 | 3e-25 | 553 - 612 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC40874 | 594 | 5e-23 | 119 - 177 | 98 | 58 / 59 | minus | ABC40874 |
| Harvest21 | ABC34099 | 483 | 5e-23 | 295 - 353 | 98 | 58 / 59 | plus | |
| Harvest21 | ABC08235 | 693 | 5e-23 | 527 - 585 | 98 | 58 / 59 | plus | |
| Harvest35 | U35_42613 | 498 | 3e-25 | 125 - 184 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_16012 | 736 | 3e-25 | 553 - 612 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_16011 | 654 | 3e-25 | 469 - 528 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_43794 | 594 | 5e-23 | 119 - 177 | 98 | 58 / 59 | minus | |
| Harvest35 | U35_16016 | 715 | 5e-23 | 527 - 585 | 98 | 58 / 59 | plus | |
| Harvest35 | U35_16014 | 1827 | 5e-23 | 1660 - 1718 | 98 | 58 / 59 | plus |
Contig Sequence (654 bp)
>U35_16011 654 Hv_44K_v2 GCCGCATACCCTCCCCTTTTATCCACCGTCCCGGAATGCCGCTCCACACCAGATCCGTGC GACCCTCCATCCCGGCACGCCGCCCCTCGGCAACACTCCCTTGCAACCCTGCTTCTGTGG TGCGCCGTTCCTCGTCACTCCTCCCCTACGGCCAACTGCGTCTACTACCTCTAGACGGGG TCCCGCGGCTATGGGGAGAGTTGCTGCTACAACCACCCTCACGATCAAGCTGTCGTGTGC AGGTATGTGGCATGCAAGCAGAGCAAAGGATGAACTTAACAATTACCAAATCTACATCAT TTGATCTGATAAGATTCAAAAGATAAATGAATGATTATATGGGTGCATGGAAACTATACA ACAATGATGAAGACGATGTTCCTGTTCATGATGATGATGATGATGATGATGATGGAGGCT TTCAGTTTTAATTAAGTTGTAGGGATGGACTTCTTGCTAGATGATGTTCCTCGTTAAGTT TTAGATAAGTTGTACGAATGTTGATGGATGCTTCGAGTTTAAGTTTTCTTGTGAAGAAAA TATTTAGATTGCACATCACATTTGGATGATGTTCCTCATGTAATATCATTATTGTAATCC AACAATTTTATCTAATATATGATTTCTTCCTCTCTTGAAAAAAAAAAAAAAAAA
Homology of Contig U35_16011 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |