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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38633_PI390587928Hv_44K_v2GTGTACACACTACAGAGTACACATTTGACGCCGAAGCCGGTGTGTTCGTTATGTAAAAAA2312GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5701.6761.1500.7290.3020.315
Raw 1165.9661895.6471157.0851143.324169.001189.602



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_69619.425589e-222418 - 247210055 / 55plus ABC03642 ABC03643 ABC40120
JLOC1JLOC1_46146.127185e-222414 - 246810055 / 55plus
Harvest35U35_1601723833e-252313 - 237210060 / 60plus



Contig Sequence (2383 bp)

>U35_16017 2383 Hv_44K_v2
GCCCCCGAGACGCCACCAGACCGCGACCACCCGCAGCTCCAGCCCGACCGACGCGCGCGG
CTCGGCTCAGCAGTCGGCGTCGTCTCGTCTCCCCCTCTCCACCGCCTCGACCCCGCCCGC
GGCCGCGCGACCCGATCCGGCCAGATCCCGCGCCGGCGGCCATGGAGAACCTGATCTCGC
TCGTCAACAAGCTGCAGCGCGCCTGCACGGCGCTCGGCGACCACGGCGAGGAGAGCGCCC
TCCCCACCCTCTGGGACTCGCTGCCGTCCATCGCCGTCGTCGGCGGCCAGAGTTCGGGCA
AATCTTCAGTGCTGGAGAGCGTTGTTGGAAAGGACTTCCTACCCAGGGGTTCAGGCATTG
TCACCCGTCGCCCGCTGGTTCTGCAACTCCATAGGATTGATGGAGACAGAGAGTATGCGG
AGTTCATGCATGTCCCCAGGAAGAGATTCACCGATTTCGCCATGGTGAGGAAGGAGATTG
CTGATGAAACTGACAGACAAACCGGCCATGGAAAGGGAATATCATCTGTCCCCATCCATT
TAAGCATATTTTCTCCATACGTTGTGAATCTGACTCTTATTGATCTTCCTGGGCTTACTA
AAGTTGCTGTTGAGGGTCAGCCCGAGAGTATTGTTCAGGAAATTGAAAACATGGTCCGTT
CATTCATCGAAAAGCCCAACTGCATCATTCTGGCTGTTTCGCCAGCCAATCAGGACCTTG
CGACTTCTGATGCTATCAAGATTTCACGGGAAGTTGACCCAAAAGGTGAAAGAACCTTTG
GTGTGCTCACGAAAATTGATTTAATGGACAAGGGTACTGATGCTGTTGATATACTGGAAG
GAAGATCTTACCGTCTCCAGTTTCCATGGATTGGTGTTGTCAATCGATCCCAGCAAGATA
TCAACAAGAGTGTGGACATGATTGCTGCTAGGCGTAGAGAGCGTGACTATTTCGCAAACA
CACCGGAATACAAGCATCTCGCTCATAGGATGGGATCAGAACATTTAGCAAAGAGTCTGT
CGAAGCATTTGGAGTCTGTTATTAAATCAAGAATCCCGGGTCTCCAGTCTCTTATAACAA
AGACAGTTGCAGAGCTGGAAACTGAACTTTCTCGTCTTGGAAAGCCCATCGCTAATGATG
CTGGAGGAAAGCTGTACACGATTATGGAAATATGCCGCATGTTTGATGGCATCTACAAAG
AGCATCTGGATGGAGTGCGCCCTGGTGGTGAGAAAATTTACCATGTATTTGACAATCAGT
TTCCTGTGGCAATTAAACGGTTGCAGTTTGATAAGCAACTGTCAATGGAAAATGTGAGGA
AGCTCATAACGGAAGCTGATGGATACCAGCCTCACTTGATAGCTCCAGAGCAAGGATATC
GACGCCTCATAGAATCTTGTCTTGTTAGTATCAGAGGTCCTGCGGAGGCAGCTGTTGACA
CGGTCCATGGAATCCTAAAGGAACTAGTCCACAAGGCTATAAATGAAACTCATGAGCTCA
AGCAGTTCCCCACTCTTCGTGTGGAAGTTGGCAATGCAGCTTTTGAGTCGTTGGAAAGAA
TGAGGGACGAAAGCAAGAAGAACACATTAAAGCTAGTTGATATGGAAACAAGCTACTTAA
CTGTAGATTTCTTCAGGAAGCTTCCTCAGGATGTTGAGAAGGGTGGAAATCCAAGCCACT
CTATTTTCGACAGATATAATGATTCTTATCTAAGACGAATTGGGACAACTGTTCTGGCAT
ATGTTAACATGGTATCTTCAACATTGAGGAACTCCATCCCAAAATCTATTGTGTACTGCC
AAGTCCGTGAGGCAAAGCGCTCATTGCTCGACCATTTCTTTACTGAGCTGGGAGCAAGAG
AGATTAGGCAACTTTCCAAGCTCCTCGACGAGGACCCCGCGGTCATGGAGCGGAGGACAA
ACCTTGCCAAGAGGCTGGAGCTGTACCGGAGCGCCCAAGCAGAGATCGACGCGGTTGCAT
GGTCAAAATAATTTTTTGTGGACTTATCGTGCCCTAGTGTGTGTTCACCTTTACTCCTTG
TTTGGTGACATCTCTCCCCTTTGCCAGAGGGGTCATATATAGCTGATTCTTTCTTCCCGT
TCTAGGTCATATATTCTTATTAGATGACAGCAGCTCTGAGGTGTGCCATGTGTTTGTGCT
TTTGCTCCTTGTGCTTGAGGATCTCTCTCTCTCTCTAGGGGGACACCTTTCTGCTGTACC
TTGTCTGTATCACGTACGAGTTCATATTATTATGATTTCCGTAACTCAAAAAAAAAAAAA
AAAAGTCCTCTTGTATCTTTGGCCCTTCTGCTGTGTACACACTACAGAGTACACATTTGA
CGCCGAAGCCGGTGTGTTCGTTATGTAAAAAAAAAAAAAAAAA



Homology of Contig U35_16017 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g48240.16100.0protein|dynamin family protein, putative, expressed
Brachypodium v1_2Bradi2g17090.16100.0
Arabidopsis v10AT5G42080.16100.0| Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9, DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=610