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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38406_PI390587928Hv_44K_v2AATAAGGACGACAATGGCTTGTTGGAATTCGTTGAAGAAGCTCTTGCTTTGCTCCGTTCG479GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_12328.513062e-24970 - 102910060 / 60plus ABC16703
MLOCMLOC_12328.211212e-24789 - 84810060 / 60plus ABC16703
MLOCMLOC_12328.112092e-24877 - 93610060 / 60plus ABC16703
MLOCMLOC_12328.317992e-241467 - 152610060 / 60plus ABC16703
MLOCMLOC_12328.416852e-241353 - 141210060 / 60plus ABC16703
JLOC1JLOC1_8272.316588e-251322 - 138110060 / 60plus
JLOC1JLOC1_8272.211338e-25797 - 85610060 / 60plus
JLOC1JLOC1_8272.112218e-25885 - 94410060 / 60plus
Harvest21ABC289785573e-25480 - 53910060 / 60plus
Harvest21ABC167038723e-25235 - 29410060 / 60minusABC16703
Harvest35U35_296125573e-25480 - 53910060 / 60plus
Harvest35U35_226898723e-25579 - 63810060 / 60plus



Contig Sequence (557 bp)

>U35_29612 557 Hv_44K_v2
CCGGCTCTGGCGGAGCTCGATGCGGCGGCCTCCTCGGATTTCTCCAAGACGTCCTCCTCC
TCCACTACCGACGCGCTCAGCTCCGTCGTCACCGCCGTGGTGCGCACGCCGCCCAAGGAC
TTCCGCGTCATCAGGAAGGAGTGGGGGCCCATCCGAATCTAGACCGCCTTCCGCGGCTTC
CTGGCCATGAGGGCGCTACGAGGGATCGTGCGGCTGCAGGCGCTGGTGCGCGGCCGTCGT
ACGCAGCTGGCCGTCACATTCAAGTGCATGCAAGCGCTCGTCAGGGTGCAAGCGTGAGCG
AGGTACCCTTAGTTATTGTTTCTTGTGTCTCCGCCACCTGCGCTGAGGACAAGTCCGACG
GCGTTCAGTCCTCCTTCACCATGGTCTCCCTCAAGTCTGCCATCTTCTAGTATCTATCAA
GTCGTGTCCTGCAGAGGAATTTTTTTCTCTTCATGCTCTTGAAGTCCAACAATTATGGAA
ATAAGGACGACAATGGCTTGTTGGAATTCGTTGAAGAAGCTCTTGCTTTGCTCCGTTCGG
CAACTCTTGCTCTGATG



Homology of Contig U35_29612 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None